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    CDH1 cadherin 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 704387, updated on 17-Aug-2024

    Summary

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    Official Symbol
    CDH1provided by VGNC
    Official Full Name
    cadherin 1provided by VGNC
    Primary source
    VGNC:VGNC:70803
    See related
    Ensembl:ENSMMUG00000011850
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 20
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 20 NC_041773.1 (55970849..56072730)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 20 NC_027912.1 (53128530..53229118)

    Chromosome 20 - NC_041773.1Genomic Context describing neighboring genes Neighboring gene 10 kDa heat shock protein, mitochondrial pseudogene Neighboring gene cadherin 3 Neighboring gene uncharacterized LOC114674404 Neighboring gene 60S ribosomal protein L34 pseudogene Neighboring gene ferritin light chain pseudogene Neighboring gene transport and golgi organization 6 homolog Neighboring gene U7 small nuclear RNA Neighboring gene U6 spliceosomal RNA

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cadherin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in adherens junction organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cell morphogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cell-cell junction assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in homophilic cell adhesion via plasma membrane adhesion molecules IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in multicellular organism development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in adherens junction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of catenin complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cadherin-1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041773.1 Reference Mmul_10 Primary Assembly

      Range
      55970849..56072730
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015126485.2 → XP_014981971.2  cadherin-1

      UniProtKB/TrEMBL
      F7H4U0, G7NQL1
      Related
      ENSMMUP00000015550.4, ENSMMUT00000016600.4
      Conserved Domains (5) summary
      cd00031
      Location:158 → 258
      CA_like; Cadherin repeat-like domain
      cd11304
      Location:492 → 591
      Cadherin_repeat; Cadherin tandem repeat domain
      pfam01049
      Location:738 → 879
      Cadherin_C; Cadherin cytoplasmic region
      pfam08758
      Location:27 → 116
      Cadherin_pro; Cadherin prodomain like
      pfam00028
      Location:592 → 686
      Cadherin; Cadherin domain
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Molecular Biology Databases
    Research Materials