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    Ppp1r7 protein phosphatase 1, regulatory subunit 7 [ Mus musculus (house mouse) ]

    Gene ID: 66385, updated on 23-Jun-2021

    Summary

    Official Symbol
    Ppp1r7provided by MGI
    Official Full Name
    protein phosphatase 1, regulatory subunit 7provided by MGI
    Primary source
    MGI:MGI:1913635
    See related
    Ensembl:ENSMUSG00000026275
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    SDS; SDS22; 2310014J01Rik
    Expression
    Ubiquitous expression in frontal lobe adult (RPKM 10.9), CNS E11.5 (RPKM 10.8) and 28 other tissues See more
    Orthologs
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    Genomic context

    See Ppp1r7 in Genome Data Viewer
    Location:
    1; 1 D
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (93271350..93295344)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (93343610..93367616)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 1 NC_000067.5 (95240222..95264195)

    Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene predicted gene 28535 Neighboring gene 60S ribosomal protein L17 pseudogene Neighboring gene PAS domain containing serine/threonine kinase Neighboring gene microRNA 6902 Neighboring gene microRNA 6345 Neighboring gene predicted gene, 26446 Neighboring gene anoctamin 7 Neighboring gene high density lipoprotein (HDL) binding protein Neighboring gene predicted gene, 17415

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in chromosome ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    protein phosphatase 1 regulatory subunit 7
    Names
    protein phosphatase 1 regulatory subunit 22
    protein phosphatase 1, regulatory (inhibitor) subunit 7

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_023200.3NP_075689.1  protein phosphatase 1 regulatory subunit 7

      See identical proteins and their annotated locations for NP_075689.1

      Status: VALIDATED

      Source sequence(s)
      AC124669, AK031983
      Consensus CDS
      CCDS15187.1
      UniProtKB/Swiss-Prot
      Q3UM45
      Related
      ENSMUSP00000027494.5, ENSMUST00000027494.11
      Conserved Domains (4) summary
      smart00446
      Location:337355
      LRRcap; occurring C-terminal to leucine-rich repeats
      sd00033
      Location:101122
      LRR_RI; leucine-rich repeat [structural motif]
      pfam12799
      Location:254295
      LRR_4; Leucine Rich repeats (2 copies)
      pfam13855
      Location:231287
      LRR_8; Leucine rich repeat

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000067.7 Reference GRCm39 C57BL/6J

      Range
      93271350..93295344
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011248057.4XP_011246359.1  protein phosphatase 1 regulatory subunit 7 isoform X1

      Conserved Domains (3) summary
      smart00446
      Location:184202
      LRRcap; occurring C-terminal to leucine-rich repeats
      sd00033
      Location:1435
      LRR_RI; leucine-rich repeat [structural motif]
      NF033189
      Location:2166
      internalin_A; class 1 internalin InlA
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