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DEHA2F04466g DEHA2F04466p [ Debaryomyces hansenii CBS767 ]

Gene ID: 8998872, updated on 17-May-2024

Summary

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Gene symbol
DEHA2F04466g
Gene description
DEHA2F04466p
Locus tag
DEHA2F04466g
See related
FungiDB:DEHA2F04466g; VEuPathDB:DEHA2F04466g
Gene type
protein coding
RNA name
DEHA2F04466p
RefSeq status
PROVISIONAL
Organism
Debaryomyces hansenii CBS767 (strain: CBS767, type-material: culture from type material of Debaryomyces hansenii)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Debaryomyces
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Genomic context

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Location:
chromosome: F
Exon count:
1
Sequence:
Chromosome: F; NC_006048.2 (405634..408375)

Chromosome F - NC_006048.2Genomic Context describing neighboring genes Neighboring gene DEHA2F04422p Neighboring gene DEHA2F04444p Neighboring gene DEHA2F04488p Neighboring gene DEHA2F04510p

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_006048.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome evolution in yeasts. Dujon B, et al. Nature, 2004 Jul 1. PMID 15229592

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DEHA2F04466p
XP_002770738.1
  • similar to uniprot|P21372 Saccharomyces cerevisiae YBR237W PRP5 RNA helicase in the DEAD-box family

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_006048.2 Reference assembly

    Range
    405634..408375
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002770692.1 → XP_002770738.1  DEHA2F04466p [Debaryomyces hansenii CBS767]

    See identical proteins and their annotated locations for XP_002770738.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    B5RU90, Q6BML1
    Conserved Domains (4) summary
    COG0513
    Location:286 → 778
    SrmB; Superfamily II DNA and RNA helicase [Replication, recombination and repair]
    cd00268
    Location:318 → 526
    DEADc; DEAD-box helicases. A diverse family of proteins involved in ATP-dependent RNA unwinding, needed in a variety of cellular processes including splicing, ribosome biogenesis and RNA degradation. The name derives from the sequence of the Walker B motif ...
    pfam00271
    Location:555 → 671
    Helicase_C; Helicase conserved C-terminal domain
    pfam12278
    Location:45 → 129
    SDP_N; Sex determination protein N terminal
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q6BML1.2

Gene LinkOut

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