KIN11 SNF1 kinase homolog 11 [Arabidopsis thaliana (thale cress)] - Gene

Summary

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Official Symbol: KIN11
Official Full Name: SNF1 kinase homolog 11
Primary source: TAIR:AT3G29160
Locus tag: AT3G29160
See related: Araport:AT3G29160
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Arabidopsis thaliana (ecotype: Columbia)
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as: AKIN11; ATKIN11; SNF1 kinase homolog 11; SNF1-RELATED PROTEIN KINASE; SNF1-RELATED PROTEIN KINASE 1.2; SNRK1.2
Summary: encodes a SNF1-related protein kinase that physically interacts with SCF subunit SKP1/ASK1 and 20S proteosome subunit PAD1. It has also been shown to interact with the WD protein PDL1.
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Genomic context

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Location:: chromosome: 3

Exon count:: 12

Sequence:: Chromosome: 3; NC_003074.8 (11128620..11132105, complement)

Chromosome 3 - NC_003074.8 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

TOR and SnRK1 fine tune SPEECHLESS transcription and protein stability to optimize stomatal development in response to exogenously supplied sugar.
Title: TOR and SnRK1 fine tune SPEECHLESS transcription and protein stability to optimize stomatal development in response to exogenously supplied sugar.
Impact of the SnRK1 protein kinase on sucrose homeostasis and the transcriptome during the diel cycle.
Title: Impact of the SnRK1 protein kinase on sucrose homeostasis and the transcriptome during the diel cycle.
The evolutionarily conserved kinase SnRK1 orchestrates resource mobilization during Arabidopsis seedling establishment.
Title: The evolutionarily conserved kinase SnRK1 orchestrates resource mobilization during Arabidopsis seedling establishment.
Arabidopsis SnRK1 negatively regulates phenylpropanoid metabolism via Kelch domain-containing F-box proteins.
Title: Arabidopsis SnRK1 negatively regulates phenylpropanoid metabolism via Kelch domain-containing F-box proteins.
Studies indicate that protein-serine-threonine kinase SnRK1 affects metabolic adaptation, including plastidial and mitochondrial functions [Review].
Title: The SnRK1 Kinase as Central Mediator of Energy Signaling between Different Organelles.
SNRK1.2 (At3g29160) role in regulating metabolism and transcription in response to cellular energy status.
Title: The Energy-Signaling Hub SnRK1 Is Important for Sucrose-Induced Hypocotyl Elongation.
FUS3 phosphorylation and SnRK1 are required for embryogenesis and integration of environmental cues to ensure the survival of the progeny.
Title: SnRK1 phosphorylation of FUSCA3 positively regulates embryogenesis, seed yield, and plant growth at high temperature in Arabidopsis.
Transcription activation function of AC2 and the inactivation of SnRK1.2 induced the transcriptome changes in Arabidopsis.
Title: Altered expression of Arabidopsis genes in response to a multifunctional geminivirus pathogenicity protein.
SnRK1 activities critically influence stress-inducible gene expression and the induction of stress tolerance. [SNRK1.2]
Title: Regulatory functions of SnRK1 in stress-responsive gene expression and in plant growth and development.
SnR2.8 might be involved in a parallel pathway for activation of AREB/ABF bZIP-type transcription factors in response to drought stress.
Title: Two closely related subclass II SnRK2 protein kinases cooperatively regulate drought-inducible gene expression.

Submit: New GeneRIF Correction See all GeneRIFs (13)

Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Homology

Orthologs from OrthoDB

NM_113839.4

Supported by ESTs:

NM_202645.3

Supported by ESTs:

NM_202646.1

Supported by ESTs:

Gene Ontology Provided by TAIR

Function	Evidence Code	Pubs
enables kinase binding	IPI Inferred from Physical Interaction more info	PubMed
enables protein binding	IPI Inferred from Physical Interaction more info	PubMed
enables protein kinase activity	IDA Inferred from Direct Assay more info	PubMed
enables protein serine/threonine kinase activity	IDA Inferred from Direct Assay more info	PubMed

Process	Evidence Code	Pubs
acts_upstream_of_or_within protein autophosphorylation	IDA Inferred from Direct Assay more info	PubMed
acts_upstream_of_or_within protein phosphorylation	IDA Inferred from Direct Assay more info	PubMed
involved_in response to trehalose	IEP Inferred from Expression Pattern more info	PubMed

Component	Evidence Code	Pubs
located_in chloroplast	IDA Inferred from Direct Assay more info	PubMed
located_in cytoplasm	IDA Inferred from Direct Assay more info	PubMed
located_in nucleus	IDA Inferred from Direct Assay more info	PubMed
located_in nucleus	ISM Inferred from Sequence Model more info
located_in plasma membrane	ISM Inferred from Sequence Model more info

General protein information

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Preferred Names: SNF1 kinase homolog 11

NP_566843.1

SNF1 kinase homolog 11 (KIN11); FUNCTIONS IN: protein binding, protein kinase activity; INVOLVED IN: protein amino acid phosphorylation, protein amino acid autophosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Protein kinase, ATP binding site (InterPro:IPR017441), Kinase-associated KA1 (InterPro:IPR001772), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Protein kinase, Snf1-like AMPK (InterPro:IPR015741), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: SNF1 kinase homolog 10 (TAIR:AT3G01090.2); Has 132401 Blast hits to 130141 proteins in 4718 species: Archae - 168; Bacteria - 14985; Metazoa - 49281; Fungi - 13291; Plants - 32075; Viruses - 530; Other Eukaryotes - 22071 (source: NCBI BLink).

NP_974374.1

SNF1 kinase homolog 11 (KIN11); FUNCTIONS IN: protein binding, protein kinase activity; INVOLVED IN: protein amino acid phosphorylation, protein amino acid autophosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Protein kinase, ATP binding site (InterPro:IPR017441), Kinase-associated KA1 (InterPro:IPR001772), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, Snf1-like AMPK (InterPro:IPR015741), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: SNF1 kinase homolog 10 (TAIR:AT3G01090.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

NP_974375.1

SNF1 kinase homolog 11 (KIN11); FUNCTIONS IN: protein binding, protein kinase activity; INVOLVED IN: protein amino acid phosphorylation, protein amino acid autophosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), Protein kinase, Snf1-like AMPK (InterPro:IPR015741), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: SNF1 kinase homolog 10 (TAIR:AT3G01090.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003074.8 Reference assembly

Range

11128620..11132105 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_202645.3 → NP_974374.1 SNF1 kinase homolog 11 [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_974374.1

Status: REVIEWED

UniProtKB/Swiss-Prot

A6XGQ9, P92958, P92968, Q3E7R4

UniProtKB/TrEMBL

A0A178V9G9, A0A5S9XH57, B9DGQ3

Conserved Domains (3) summary

cd12122
Location:391 → 509

AMPKA_C; C-terminal regulatory domain of 5'-AMP-activated protein kinase (AMPK) alpha catalytic subunit

cd14335
Location:294 → 334

UBA_SnRK1_plant; UBA domain found in the plant sucrose nonfermenting-1-related kinase (SnRK1) proteins

cd14079
Location:17 → 272

STKc_AMPK_alpha; Catalytic domain of the Alpha subunit of the Serine/Threonine Kinase, AMP-activated protein kinase
NM_113839.4 → NP_566843.1 SNF1 kinase homolog 11 [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_566843.1

Status: REVIEWED

UniProtKB/Swiss-Prot

A6XGQ9, P92958, P92968, Q3E7R4

UniProtKB/TrEMBL

A0A178V9G9, A0A5S9XH57, B9DGQ3

Conserved Domains (3) summary

cd12122
Location:391 → 509

AMPKA_C; C-terminal regulatory domain of 5'-AMP-activated protein kinase (AMPK) alpha catalytic subunit

cd14335
Location:294 → 334

UBA_SnRK1_plant; UBA domain found in the plant sucrose nonfermenting-1-related kinase (SnRK1) proteins

cd14079
Location:17 → 272

STKc_AMPK_alpha; Catalytic domain of the Alpha subunit of the Serine/Threonine Kinase, AMP-activated protein kinase
NM_202646.1 → NP_974375.1 SNF1 kinase homolog 11 [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_974375.1

Status: REVIEWED

UniProtKB/Swiss-Prot

P92958

Conserved Domains (3) summary

smart00220
Location:20 → 272

S_TKc; Serine/Threonine protein kinases, catalytic domain

cd14335
Location:294 → 334

UBA_SnRK1_plant; UBA domain found in the plant sucrose nonfermenting-1-related kinase (SnRK1) proteins

cd14079
Location:17 → 272

STKc_AMPK_alpha; Catalytic domain of the Alpha subunit of the Serine/Threonine Kinase, AMP-activated protein kinase