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ANP32A acidic nuclear phosphoprotein 32 family member A [ Homo sapiens (human) ]

Gene ID: 8125, updated on 2-Nov-2024

Summary

Official Symbol
ANP32Aprovided by HGNC
Official Full Name
acidic nuclear phosphoprotein 32 family member Aprovided by HGNC
Primary source
HGNC:HGNC:13233
See related
Ensembl:ENSG00000140350 MIM:600832; AllianceGenome:HGNC:13233
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
LANP; MAPM; PP32; HPPCn; PHAP1; PHAPI; I1PP2A; C15orf1
Summary
Enables RNA binding activity. Involved in nucleocytoplasmic transport. Located in endoplasmic reticulum; nucleus; and perinuclear region of cytoplasm. [provided by Alliance of Genome Resources, Nov 2024]
Expression
Ubiquitous expression in lymph node (RPKM 45.8), bone marrow (RPKM 40.5) and 25 other tissues See more
Orthologs
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Genomic context

See ANP32A in Genome Data Viewer
Location:
15q23
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 15 NC_000015.10 (68778535..68820895, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 15 NC_060939.1 (66601108..66643452, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 15 NC_000015.9 (69070874..69113234, complement)

Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene coronin 2B Neighboring gene uncharacterized LOC124903514 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:68943583-68944150 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr15:68944208-68944708 Neighboring gene Sharpr-MPRA regulatory region 8573 Neighboring gene H3K27ac hESC enhancer GRCh37_chr15:68961677-68962176 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:68966278-68966778 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:68987247-68987836 Neighboring gene heart enhancer 11 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 6588 Neighboring gene cysteinyl-tRNA synthetase 1 pseudogene 1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:69080134-69080641 Neighboring gene H3K27ac hESC enhancer GRCh37_chr15:69083767-69084268 Neighboring gene H3K27ac hESC enhancer GRCh37_chr15:69084269-69084768 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 9648 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr15:69087559-69088131 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 9650 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:69103956-69104456 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 9651 Neighboring gene H3K27ac hESC enhancer GRCh37_chr15:69109604-69110186 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr15:69111351-69111932 Neighboring gene ANP32A intronic transcript 1 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 6591 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 6590 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr15:69111933-69112514 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 6593 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 6594 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 6595 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr15:69115796-69116596 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 9652 Neighboring gene microRNA 4312 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 9653 Neighboring gene cytokine induced apoptosis inhibitor 1 pseudogene Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr15:69167471-69168078 Neighboring gene MPRA-validated peak2374 silencer Neighboring gene SPESP1-NOX5 readthrough Neighboring gene sperm equatorial segment protein 1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Phenotypes

EBI GWAS Catalog

Description
Genome-wide association study identifies three new susceptibility loci for esophageal squamous-cell carcinoma in Chinese populations.
EBI GWAS Catalog

HIV-1 interactions

Protein interactions

Protein Gene Interaction Pubs
Rev rev The interaction of Rev with ANP32A is decreased by the presence of RRE PubMed
rev HIV-1 Rev interacting protein, acidic (leucine-rich) nuclear phosphoprotein 32 family, member A (ANP32A), is identified by the in-vitro binding experiments involving cytosolic or nuclear extracts from HeLa cells PubMed

Go to the HIV-1, Human Interaction Database

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Clone Names

  • MGC119787, MGC150373

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables RNA binding HDA PubMed 
enables histone binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
involved_in intracellular signal transduction TAS
Traceable Author Statement
more info
PubMed 
involved_in nucleocytoplasmic transport IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in nucleocytoplasmic transport IDA
Inferred from Direct Assay
more info
PubMed 
involved_in nucleocytoplasmic transport NAS
Non-traceable Author Statement
more info
PubMed 
involved_in regulation of apoptotic process IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
located_in cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 
located_in endoplasmic reticulum IDA
Inferred from Direct Assay
more info
PubMed 
located_in nucleoplasm TAS
Traceable Author Statement
more info
 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in nucleus IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in perinuclear region of cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in perinuclear region of cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
acidic leucine-rich nuclear phosphoprotein 32 family member A
Names
acidic (leucine-rich) nuclear phosphoprotein 32 family, member A
acidic nuclear phosphoprotein pp32
cerebellar leucine rich acidic nuclear protein
epididymis secretory sperm binding protein
hepatopoietin Cn
inhibitor-1 of protein phosphatase-2A
leucine-rich acidic nuclear protein
mapmodulin
potent heat-stable protein phosphatase 2A inhibitor I1PP2A
putative HLA-DR-associated protein I
putative human HLA class II associated protein I

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_006305.4NP_006296.1  acidic leucine-rich nuclear phosphoprotein 32 family member A

    See identical proteins and their annotated locations for NP_006296.1

    Status: VALIDATED

    Source sequence(s)
    BC007200, BC064969, DA825897
    Consensus CDS
    CCDS45292.1
    UniProtKB/Swiss-Prot
    B2R6T4, P39687, Q53FK4, Q5J8L8, Q7M4N6
    UniProtKB/TrEMBL
    A0A384P5U2
    Related
    ENSP00000417864.2, ENST00000465139.6
    Conserved Domains (2) summary
    sd00033
    Location:90114
    LRR_RI; leucine-rich repeat [structural motif]
    pfam14580
    Location:71146
    LRR_9; Leucine-rich repeat

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000015.10 Reference GRCh38.p14 Primary Assembly

    Range
    68778535..68820895 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060939.1 Alternate T2T-CHM13v2.0

    Range
    66601108..66643452 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)