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LOC8081851 methionine--tRNA ligase, chloroplastic/mitochondrial [ Sorghum bicolor (sorghum) ]

Gene ID: 8081851, updated on 22-Oct-2023

Summary

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Gene symbol
LOC8081851
Gene description
methionine--tRNA ligase, chloroplastic/mitochondrial
Locus tag
SORBI_3001G461700
Gene type
protein coding
RefSeq status
MODEL
Organism
Sorghum bicolor
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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Genomic context

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Location:
chromosome: 1
Exon count:
12
Annotation release Status Assembly Chr Location
101 current Sorghum_bicolor_NCBIv3 (GCF_000003195.3) 1 NC_012870.2 (73644133..73651289)

Chromosome 1 - NC_012870.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC8081849 Neighboring gene cysteine proteinase inhibitor 8 Neighboring gene probable protein S-acyltransferase 22 Neighboring gene vesicle transport protein GOT1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012870.2 Chromosome 1 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables methionine-tRNA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in methionyl-tRNA aminoacylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast stroma IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
methionine--tRNA ligase, chloroplastic/mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sorghum bicolor Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sorghum_bicolor_NCBIv3 Primary Assembly

Genomic

  1. NC_012870.2 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

    Range
    73644133..73651289
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002465619.2 → XP_002465664.1  methionine--tRNA ligase, chloroplastic/mitochondrial

    See identical proteins and their annotated locations for XP_002465664.1

    UniProtKB/TrEMBL
    A0A921V1J3, C5WTP7
    Conserved Domains (3) summary
    cd07957
    Location:404 → 534
    Anticodon_Ia_Met; Anticodon-binding domain of methionyl tRNA synthetases
    cd00814
    Location:60 → 395
    MetRS_core; catalytic core domain of methioninyl-tRNA synthetases
    PRK11893
    Location:59 → 573
    PRK11893; methionyl-tRNA synthetase; Reviewed
Nucleotide Protein
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