NEW
Try the new Transcript table
These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_029186.2 RefSeqGene
- Range
-
39169..230264
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_004342.7 → NP_004333.1 caldesmon isoform 2
See identical proteins and their annotated locations for NP_004333.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) uses an alternate in-frame splice site and lacks an alternate in-frame exon in the central coding region, compared to variant 1. It is mainly expressed in non-muscle tissues or cells. The resulting isoform (2, also known as WI-38 l-CaD II) lacks an internal region, compared to isoform 1.
- Source sequence(s)
-
AU134367, BC040354, CA447404, CN314587, CV573441, DA546174, DB090561
- Consensus CDS
-
CCDS5834.1
- UniProtKB/Swiss-Prot
-
Q05682
- UniProtKB/TrEMBL
-
A0A140VKA0
- Related
- ENSP00000354513.2, ENST00000361901.6
- Conserved Domains (1) summary
-
- pfam02029
Location:267 → 525
- Caldesmon; Caldesmon
-
NM_033138.4 → NP_149129.2 caldesmon isoform 1
See identical proteins and their annotated locations for NP_149129.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes the longest isoform (1, also known as aorta h-CaD). It is predominantly expressed in smooth muscle tissues.
- Source sequence(s)
-
AC083870, AU134367, CA447404, CN314587, CV573441, DA546174, DB090561, M83216
- Consensus CDS
-
CCDS5835.1
- UniProtKB/Swiss-Prot
- Q05682, Q9UD91
- Related
- ENSP00000354826.2, ENST00000361675.7
- Conserved Domains (1) summary
-
- pfam02029
Location:517 → 780
- Caldesmon; Caldesmon
-
NM_033139.4 → NP_149130.1 caldesmon isoform 4
See identical proteins and their annotated locations for NP_149130.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) differs in the 5' UTR and 5' coding region, and uses an alternate in-frame splice site in the central coding region, compared to variant 1. It is mainly expressed in non-muscle tissues or cells. The resulting isoform (4, also known as HeLa l-CaD I) contains a distinct N-terminus and is shorter than isoform 1.
- Source sequence(s)
-
AC083870, AU134367, CA447404, CK821334, CN314587, CV573441, D90452, DA323544, DA546174
- Consensus CDS
-
CCDS47716.1
- UniProtKB/Swiss-Prot
-
Q05682
- Related
- ENSP00000376826.2, ENST00000393118.7
- Conserved Domains (1) summary
-
- pfam02029
Location:282 → 545
- Caldesmon; Caldesmon
-
NM_033140.4 → NP_149131.1 caldesmon isoform 5
See identical proteins and their annotated locations for NP_149131.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) differs in the 5' UTR and 5' coding region, and uses an alternate in-frame splice site and lacks an alternate in-frame exon in the central coding region, compared to variant 1. It is mainly expressed in non-muscle tissues or cells. The resulting isoform (5, also known as HeLa l-CaD II) has a distinct N-terminus and is shorter than isoform 1.
- Source sequence(s)
-
AC083870, AU134367, CA447404, CK821334, CN314587, CV573441, D90453, DA323544, DA546174
- Consensus CDS
-
CCDS47717.1
- UniProtKB/Swiss-Prot
-
Q05682
- Related
- ENSP00000393621.1, ENST00000424922.5
- Conserved Domains (1) summary
-
- pfam02029
Location:256 → 519
- Caldesmon; Caldesmon
-
NM_033157.4 → NP_149347.2 caldesmon isoform 3
See identical proteins and their annotated locations for NP_149347.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) uses two alternate in-frame splice sites in the central coding region, compared to variant 1. It is mainly expressed in non-muscle tissues or cells. The resulting isoform (3, also known as WI-38 l-CaD I) is shorter than isoform 1.
- Source sequence(s)
-
AK289686, AU134367, CA447404, CN314587, CV573441, DA546174
- Consensus CDS
-
CCDS5836.2
- UniProtKB/Swiss-Prot
-
Q05682
- Related
- ENSP00000395710.1, ENST00000422748.5
- Conserved Domains (1) summary
-
- pfam02029
Location:288 → 550
- Caldesmon; Caldesmon