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c1qtnf12 C1q and TNF related 12 [ Danio rerio (zebrafish) ]

Gene ID: 790933, updated on 27-Mar-2024

Summary

Official Symbol
c1qtnf12provided by ZNC
Official Full Name
C1q and TNF related 12provided by ZNC
Primary source
ZFIN:ZDB-GENE-061215-120
See related
Ensembl:ENSDARG00000070681 AllianceGenome:ZFIN:ZDB-GENE-061215-120
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
fam132a; zgc:158358
Summary
Predicted to enable hormone activity. Predicted to be involved in regulation of glucose import. Predicted to act upstream of or within Wnt signaling pathway. Predicted to be located in extracellular region. Predicted to be active in extracellular space. Orthologous to several human genes including C1QTNF12 (C1q and TNF related 12). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

Location:
chromosome: 23
Exon count:
8
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 23 NC_007134.7 (24704393..24750930)
105 previous assembly GRCz10 (GCF_000002035.5) 23 NC_007134.6 (24777640..24822123)

Chromosome 23 - NC_007134.7Genomic Context describing neighboring genes Neighboring gene microRNA 26b Neighboring gene CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2 Neighboring gene stromal cell derived factor 4 Neighboring gene olfactomedin-like 3a Neighboring gene synaptotagmin VIa

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General gene information

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables hormone activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables hormone activity IEA
Inferred from Electronic Annotation
more info
 
enables hormone activity ISS
Inferred from Sequence or Structural Similarity
more info
 
Process Evidence Code Pubs
involved_in regulation of glucose import ISS
Inferred from Sequence or Structural Similarity
more info
 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 
located_in extracellular region ISS
Inferred from Sequence or Structural Similarity
more info
 
is_active_in extracellular space IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
adipolin
Names
C1QDC2
adipose-derived insulin-sensitizing factor
complement C1q tumor necrosis factor-related protein 12
family with sequence similarity 132, member A
protein FAM132A

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001080078.1NP_001073547.1  adipolin precursor

    See identical proteins and their annotated locations for NP_001073547.1

    Status: PROVISIONAL

    Source sequence(s)
    BC128849
    UniProtKB/Swiss-Prot
    A1A5X5
    Related
    ENSDARP00000094804.3, ENSDART00000104029.4
    Conserved Domains (1) summary
    cl23878
    Location:185316
    C1q; C1q domain

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007134.7 Reference GRCz11 Primary Assembly

    Range
    24704393..24750930
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005162187.4XP_005162244.1  adipolin isoform X1

    UniProtKB/TrEMBL
    A0A8M2B9C4
    Conserved Domains (1) summary
    cl23878
    Location:184315
    C1q; C1q domain