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ZFAND5 zinc finger AN1-type containing 5 [ Homo sapiens (human) ]

Gene ID: 7763, updated on 13-Mar-2020

Summary

Official Symbol
ZFAND5provided by HGNC
Official Full Name
zinc finger AN1-type containing 5provided by HGNC
Primary source
HGNC:HGNC:13008
See related
Ensembl:ENSG00000107372 MIM:604761
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
ZA20D2; ZNF216; ZFAND5A
Expression
Ubiquitous expression in fat (RPKM 113.8), adrenal (RPKM 84.6) and 25 other tissues See more
Orthologs

Genomic context

See ZFAND5 in Genome Data Viewer
Location:
9q21.13
Exon count:
8
Annotation release Status Assembly Chr Location
109.20200228 current GRCh38.p13 (GCF_000001405.39) 9 NC_000009.12 (72351413..72365208, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (74966341..74980163, complement)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene RNA, 5S ribosomal pseudogene 285 Neighboring gene long intergenic non-protein coding RNA 1504 Neighboring gene ribosomal protein S12 pseudogene Neighboring gene Sharpr-MPRA regulatory region 9116

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
DNA binding IEA
Inferred from Electronic Annotation
more info
 
molecular_function ND
No biological Data available
more info
 
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
zinc ion binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
biological_process ND
No biological Data available
more info
 
face development IEA
Inferred from Electronic Annotation
more info
 
fibroblast migration IEA
Inferred from Electronic Annotation
more info
 
in utero embryonic development IEA
Inferred from Electronic Annotation
more info
 
platelet-derived growth factor receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 
respiratory system process IEA
Inferred from Electronic Annotation
more info
 
skeletal system morphogenesis IEA
Inferred from Electronic Annotation
more info
 
smooth muscle tissue development IEA
Inferred from Electronic Annotation
more info
 
vasculature development IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
cellular_component ND
No biological Data available
more info
 
cytoplasm IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
AN1-type zinc finger protein 5
Names
zinc finger A20 domain-containing protein 2
zinc finger protein 216
zinc finger, A20 domain containing 2
zinc finger, AN1-type domain 5

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001102420.3NP_001095890.1  AN1-type zinc finger protein 5

    See identical proteins and their annotated locations for NP_001095890.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (a) represents the longest transcript. All six variants encode the same protein.
    Source sequence(s)
    AL135924
    Consensus CDS
    CCDS6642.1
    UniProtKB/Swiss-Prot
    O76080
    UniProtKB/TrEMBL
    A0A024R219
    Related
    ENSP00000366161.5, ENST00000376962.10
    Conserved Domains (2) summary
    smart00154
    Location:154191
    ZnF_AN1; AN1-like Zinc finger
    pfam01754
    Location:1235
    zf-A20; A20-like zinc finger
  2. NM_001102421.3NP_001095891.1  AN1-type zinc finger protein 5

    See identical proteins and their annotated locations for NP_001095891.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (b) differs in the 5' UTR compared to variant a. All six variants encode the same protein.
    Source sequence(s)
    AL135924
    Consensus CDS
    CCDS6642.1
    UniProtKB/Swiss-Prot
    O76080
    UniProtKB/TrEMBL
    A0A024R219
    Related
    ENSP00000366159.4, ENST00000376960.8
    Conserved Domains (2) summary
    smart00154
    Location:154191
    ZnF_AN1; AN1-like Zinc finger
    pfam01754
    Location:1235
    zf-A20; A20-like zinc finger
  3. NM_001278243.2NP_001265172.1  AN1-type zinc finger protein 5

    See identical proteins and their annotated locations for NP_001265172.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (d) differs in the 5' UTR compared to variant a. All six variants encode the same protein.
    Source sequence(s)
    AL135924
    Consensus CDS
    CCDS6642.1
    UniProtKB/Swiss-Prot
    O76080
    UniProtKB/TrEMBL
    A0A024R219
    Related
    ENSP00000350586.2, ENST00000343431.6
    Conserved Domains (2) summary
    smart00154
    Location:154191
    ZnF_AN1; AN1-like Zinc finger
    pfam01754
    Location:1235
    zf-A20; A20-like zinc finger
  4. NM_001278244.1NP_001265173.1  AN1-type zinc finger protein 5

    See identical proteins and their annotated locations for NP_001265173.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (e) differs in the 5' UTR compared to variant a. All six variants encode the same protein.
    Source sequence(s)
    AL135924, BC073131, BX489434, DA290666
    Consensus CDS
    CCDS6642.1
    UniProtKB/Swiss-Prot
    O76080
    UniProtKB/TrEMBL
    A0A024R219
    Related
    ENSP00000237937.3, ENST00000237937.7
    Conserved Domains (2) summary
    smart00154
    Location:154191
    ZnF_AN1; AN1-like Zinc finger
    pfam01754
    Location:1235
    zf-A20; A20-like zinc finger
  5. NM_001278245.2NP_001265174.1  AN1-type zinc finger protein 5

    See identical proteins and their annotated locations for NP_001265174.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (f) differs in the 5' UTR compared to variant a. All six variants encode the same protein.
    Source sequence(s)
    AL135924
    Consensus CDS
    CCDS6642.1
    UniProtKB/Swiss-Prot
    O76080
    UniProtKB/TrEMBL
    A0A024R219
    Conserved Domains (2) summary
    smart00154
    Location:154191
    ZnF_AN1; AN1-like Zinc finger
    pfam01754
    Location:1235
    zf-A20; A20-like zinc finger
  6. NM_006007.4NP_005998.1  AN1-type zinc finger protein 5

    See identical proteins and their annotated locations for NP_005998.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (c) differs in the 5' UTR compared to variant a. All six variants encode the same protein.
    Source sequence(s)
    AL135924
    Consensus CDS
    CCDS6642.1
    UniProtKB/Swiss-Prot
    O76080
    UniProtKB/TrEMBL
    A0A024R219
    Conserved Domains (2) summary
    smart00154
    Location:154191
    ZnF_AN1; AN1-like Zinc finger
    pfam01754
    Location:1235
    zf-A20; A20-like zinc finger

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p13 Primary Assembly

    Range
    72351413..72365208 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024447665.1XP_024303433.1  AN1-type zinc finger protein 5 isoform X1

    Conserved Domains (2) summary
    smart00154
    Location:154191
    ZnF_AN1; AN1-like Zinc finger
    pfam01754
    Location:1235
    zf-A20; A20-like zinc finger
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