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CASP6 caspase 6 [ Pan troglodytes (chimpanzee) ]

Gene ID: 736606, updated on 2-Nov-2023

Summary

Official Symbol
CASP6provided by VGNC
Official Full Name
caspase 6provided by VGNC
Primary source
VGNC:VGNC:58511
Locus tag
CK820_G0024090
See related
Ensembl:ENSPTRG00000046752
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
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Genomic context

See CASP6 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_04 current NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 4 NC_072402.1 (111141733..111163656, complement)

Chromosome 4 - NC_072402.1Genomic Context describing neighboring genes Neighboring gene mitochondrial calcium uniporter dominant negative subunit beta Neighboring gene uncharacterized LOC107974369 Neighboring gene HIG1 hypoxia inducible domain family member 1A pseudogene Neighboring gene phospholipase A2 group XIIA Neighboring gene complement factor I Neighboring gene GAR1 ribonucleoprotein

Genomic regions, transcripts, and products

Genomic Sequence:
NC_072402.1 Chromosome 4 Reference NHGRI_mPanTro3-v1.1-hic.freeze_pri

Pathways from PubChem

General gene information

Markers

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in apoptotic process IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
caspase-6
Names
caspase 6, apoptosis-related cysteine peptidase
XP_016807502.1
XP_016807503.1
XP_016807504.1
XP_016807505.1
XP_016807507.1
XP_016807508.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v1.1-hic.freeze_pri

Genomic

  1. NC_072402.1 Reference NHGRI_mPanTro3-v1.1-hic.freeze_pri

    Range
    111141733..111163656 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016952014.3XP_016807503.1  caspase-6 isoform X2

  2. XM_016952018.3XP_016807507.1  caspase-6 isoform X3

  3. XM_016952013.3XP_016807502.1  caspase-6 isoform X1

    UniProtKB/TrEMBL
    A0A2J8M2C8, A0A6D2XYB7, K7B3Z2
    Related
    ENSPTRP00000080795.1
    Conserved Domains (1) summary
    smart00115
    Location:37290
    CASc; Caspase, interleukin-1 beta converting enzyme (ICE) homologues
  4. XM_016952019.3XP_016807508.1  caspase-6 isoform X4

    UniProtKB/TrEMBL
    A0A2I3RZ85, A0A2J8M2E0, A0A6D2Y514
    Related
    ENSPTRP00000069930.1
    Conserved Domains (1) summary
    cd00032
    Location:14200
    CASc; Caspase, interleukin-1 beta converting enzyme (ICE) homologues; Cysteine-dependent aspartate-directed proteases that mediate programmed cell death (apoptosis). Caspases are synthesized as inactive zymogens and activated by proteolysis of the peptide ...
  5. XM_016952015.3XP_016807504.1  caspase-6 isoform X3

  6. XM_016952016.3XP_016807505.1  caspase-6 isoform X3