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FOXP1 forkhead box P1 [ Pan troglodytes (chimpanzee) ]

Gene ID: 736525, updated on 17-Aug-2024

Summary

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Official Symbol
FOXP1provided by VGNC
Official Full Name
forkhead box P1provided by VGNC
Primary source
VGNC:VGNC:6266
Locus tag
CK820_G0004747
See related
Ensembl:ENSPTRG00000015101
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
37
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 2 NC_086015.1 (74948210..75577836, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 3 NC_072401.1 (74947929..75577219, complement)

Chromosome 2 - NC_086015.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC129143506 Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC104005616 Neighboring gene uncharacterized LOC134809482 Neighboring gene microRNA mir-1284 Neighboring gene eukaryotic translation initiation factor 4E family member 3 Neighboring gene G protein-coupled receptor 27

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Major chimpanzee-specific structural changes in sperm development-associated genes. Kim RN, et al. Funct Integr Genomics, 2011 Sep. PMID 21484476

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription repressor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
forkhead box protein P1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_086015.1 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    74948210..75577836 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054682054.1 → XP_054538029.1  forkhead box protein P1 isoform X4

    UniProtKB/TrEMBL
    A0A2I3RVM4, A0A2I3S7Z6, A0A2J8P716, A0A6D2WE10

  2. XM_063806001.1 → XP_063662071.1  forkhead box protein P1 isoform X4

    UniProtKB/TrEMBL
    A0A2I3RVM4, A0A2I3S7Z6, A0A2J8P716, A0A6D2WE10

  3. XM_054682057.2 → XP_054538032.1  forkhead box protein P1 isoform X7

    UniProtKB/TrEMBL
    A0A2I3S7Z6, A0A2J8P708

  4. XM_024355236.3 → XP_024211004.1  forkhead box protein P1 isoform X10

    UniProtKB/TrEMBL
    A0A2I3S7Z6, A0A2I3TB78, A0A2J8P724, A0A6D2Y1S6
    Conserved Domains (3) summary
    COG5025
    Location:361 → 575
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
    pfam16159
    Location:226 → 293
    FOXP-CC; FOXP coiled-coil domain
    cd20065
    Location:388 → 469
    FH_FOXP2; Forkhead (FH) domain found in Forkhead box protein P2 (FOXP2)

  5. XM_024355235.3 → XP_024211003.1  forkhead box protein P1 isoform X6

    UniProtKB/TrEMBL
    A0A2I3S7Z6
    Conserved Domains (3) summary
    COG5025
    Location:436 → 650
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
    pfam16159
    Location:301 → 368
    FOXP-CC; FOXP coiled-coil domain
    cd20065
    Location:463 → 544
    FH_FOXP2; Forkhead (FH) domain found in Forkhead box protein P2 (FOXP2)

  6. XM_001140832.8 → XP_001140832.1  forkhead box protein P1 isoform X7

    See identical proteins and their annotated locations for XP_001140832.1

    UniProtKB/TrEMBL
    A0A2I3S7Z6, A0A2J8P708
    Conserved Domains (3) summary
    COG5025
    Location:437 → 650
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
    pfam16159
    Location:302 → 369
    FOXP-CC; FOXP coiled-coil domain
    cd20065
    Location:463 → 544
    FH_FOXP2; Forkhead (FH) domain found in Forkhead box protein P2 (FOXP2)

  7. XM_001140904.8 → XP_001140904.1  forkhead box protein P1 isoform X4

    See identical proteins and their annotated locations for XP_001140904.1

    UniProtKB/TrEMBL
    A0A2I3RVM4, A0A2I3S7Z6, A0A2J8P716, A0A6D2WE10
    Conserved Domains (3) summary
    COG5025
    Location:437 → 651
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
    pfam16159
    Location:302 → 369
    FOXP-CC; FOXP coiled-coil domain
    cd20065
    Location:464 → 545
    FH_FOXP2; Forkhead (FH) domain found in Forkhead box protein P2 (FOXP2)

  8. XM_063806002.1 → XP_063662072.1  forkhead box protein P1 isoform X7

    UniProtKB/TrEMBL
    A0A2I3S7Z6, A0A2J8P708

  9. XM_054682055.1 → XP_054538030.1  forkhead box protein P1 isoform X4

    UniProtKB/TrEMBL
    A0A2I3RVM4, A0A2I3S7Z6, A0A2J8P716, A0A6D2WE10

  10. XM_016940111.4 → XP_016795600.1  forkhead box protein P1 isoform X16

    UniProtKB/TrEMBL
    A0A2I3S7Z6, A0A2I3SFB7, A0A2J8P709, A0A6D2X255
    Related
    ENSPTRP00000075187.1
    Conserved Domains (2) summary
    pfam16159
    Location:302 → 369
    FOXP-CC; FOXP coiled-coil domain
    cl00061
    Location:464 → 545
    FH_FOX; Forkhead (FH) domain found in Forkhead box (FOX) family of transcription factors and similar proteins

  11. XM_016940105.4 → XP_016795594.1  forkhead box protein P1 isoform X4

    UniProtKB/TrEMBL
    A0A2I3RVM4, A0A2I3S7Z6, A0A2J8P716, A0A6D2WE10
    Conserved Domains (3) summary
    COG5025
    Location:437 → 651
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
    pfam16159
    Location:302 → 369
    FOXP-CC; FOXP coiled-coil domain
    cd20065
    Location:464 → 545
    FH_FOXP2; Forkhead (FH) domain found in Forkhead box protein P2 (FOXP2)

  12. XM_054682056.2 → XP_054538031.1  forkhead box protein P1 isoform X4

    UniProtKB/TrEMBL
    A0A2I3RVM4, A0A2I3S7Z6, A0A2J8P716, A0A6D2WE10

  13. XM_054682060.1 → XP_054538035.1  forkhead box protein P1 isoform X8

    UniProtKB/TrEMBL
    A0A2I3S7Z6

  14. XM_024355233.2 → XP_024211001.1  forkhead box protein P1 isoform X4

    UniProtKB/TrEMBL
    A0A2I3RVM4, A0A2I3S7Z6, A0A2J8P716, A0A6D2WE10
    Conserved Domains (3) summary
    COG5025
    Location:437 → 651
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
    pfam16159
    Location:302 → 369
    FOXP-CC; FOXP coiled-coil domain
    cd20065
    Location:464 → 545
    FH_FOXP2; Forkhead (FH) domain found in Forkhead box protein P2 (FOXP2)

  15. XM_054682058.2 → XP_054538033.1  forkhead box protein P1 isoform X7

    UniProtKB/TrEMBL
    A0A2I3S7Z6, A0A2J8P708

  16. XM_054682053.2 → XP_054538028.1  forkhead box protein P1 isoform X4

    UniProtKB/TrEMBL
    A0A2I3RVM4, A0A2I3S7Z6, A0A2J8P716, A0A6D2WE10

  17. XM_016940108.4 → XP_016795597.1  forkhead box protein P1 isoform X4

    UniProtKB/TrEMBL
    A0A2I3RVM4, A0A2I3S7Z6, A0A2J8P716, A0A6D2WE10
    Related
    ENSPTRP00000068781.1
    Conserved Domains (3) summary
    COG5025
    Location:437 → 651
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
    pfam16159
    Location:302 → 369
    FOXP-CC; FOXP coiled-coil domain
    cd20065
    Location:464 → 545
    FH_FOXP2; Forkhead (FH) domain found in Forkhead box protein P2 (FOXP2)

  18. XM_063806005.1 → XP_063662075.1  forkhead box protein P1 isoform X12

    UniProtKB/TrEMBL
    A0A2I3S7Z6

  19. XM_063806003.1 → XP_063662073.1  forkhead box protein P1 isoform X11

    UniProtKB/TrEMBL
    A0A2I3S7D8, A0A2I3S7Z6, A0A2J8P738, A0A6D2VSD8

  20. XM_009445850.5 → XP_009444125.1  forkhead box protein P1 isoform X9

    See identical proteins and their annotated locations for XP_009444125.1

    UniProtKB/TrEMBL
    A0A2J8P719
    Conserved Domains (3) summary
    COG5025
    Location:363 → 577
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
    pfam16159
    Location:228 → 295
    FOXP-CC; FOXP coiled-coil domain
    cd20065
    Location:390 → 471
    FH_FOXP2; Forkhead (FH) domain found in Forkhead box protein P2 (FOXP2)

  21. XM_024355234.3 → XP_024211002.1  forkhead box protein P1 isoform X5

    UniProtKB/TrEMBL
    A0A2J8P719
    Conserved Domains (3) summary
    COG5025
    Location:438 → 651
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
    pfam16159
    Location:303 → 370
    FOXP-CC; FOXP coiled-coil domain
    cd20065
    Location:464 → 545
    FH_FOXP2; Forkhead (FH) domain found in Forkhead box protein P2 (FOXP2)

  22. XM_009445844.4 → XP_009444119.1  forkhead box protein P1 isoform X2

    See identical proteins and their annotated locations for XP_009444119.1

    UniProtKB/TrEMBL
    A0A2J8P719
    Conserved Domains (3) summary
    COG5025
    Location:438 → 652
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
    pfam16159
    Location:303 → 370
    FOXP-CC; FOXP coiled-coil domain
    cd20065
    Location:465 → 546
    FH_FOXP2; Forkhead (FH) domain found in Forkhead box protein P2 (FOXP2)

  23. XM_009445845.5 → XP_009444120.1  forkhead box protein P1 isoform X3

    See identical proteins and their annotated locations for XP_009444120.1

    UniProtKB/TrEMBL
    A0A2J8P719
    Conserved Domains (3) summary
    COG5025
    Location:439 → 652
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
    pfam16159
    Location:304 → 371
    FOXP-CC; FOXP coiled-coil domain
    cd20065
    Location:465 → 546
    FH_FOXP2; Forkhead (FH) domain found in Forkhead box protein P2 (FOXP2)

  24. XM_001141148.7 → XP_001141148.3  forkhead box protein P1 isoform X1

    See identical proteins and their annotated locations for XP_001141148.3

    UniProtKB/TrEMBL
    A0A2I3TS10, A0A2J8P719, A0A2J8P720, A0A6D2YCF0
    Related
    ENSPTRP00000092029.1
    Conserved Domains (3) summary
    COG5025
    Location:439 → 653
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
    pfam16159
    Location:304 → 371
    FOXP-CC; FOXP coiled-coil domain
    cd20065
    Location:466 → 547
    FH_FOXP2; Forkhead (FH) domain found in Forkhead box protein P2 (FOXP2)

  25. XM_063806007.1 → XP_063662077.1  forkhead box protein P1 isoform X13

    UniProtKB/TrEMBL
    A0A2I3S7Z6

  26. XM_054682061.1 → XP_054538036.1  forkhead box protein P1 isoform X11

    UniProtKB/TrEMBL
    A0A2I3S7D8, A0A2I3S7Z6, A0A2J8P738, A0A6D2VSD8

  27. XM_003950141.6 → XP_003950190.1  forkhead box protein P1 isoform X11

    See identical proteins and their annotated locations for XP_003950190.1

    UniProtKB/TrEMBL
    A0A2I3S7D8, A0A2I3S7Z6, A0A2J8P738, A0A6D2VSD8
    Conserved Domains (3) summary
    COG5025
    Location:337 → 551
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
    pfam16159
    Location:202 → 269
    FOXP-CC; FOXP coiled-coil domain
    cd20065
    Location:364 → 445
    FH_FOXP2; Forkhead (FH) domain found in Forkhead box protein P2 (FOXP2)

  28. XM_054682062.1 → XP_054538037.1  forkhead box protein P1 isoform X13

    UniProtKB/TrEMBL
    A0A2I3S7Z6

  29. XM_009445856.4 → XP_009444131.1  forkhead box protein P1 isoform X12

    See identical proteins and their annotated locations for XP_009444131.1

    UniProtKB/TrEMBL
    A0A2I3S7Z6
    Conserved Domains (3) summary
    COG5025
    Location:336 → 550
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
    pfam16159
    Location:201 → 268
    FOXP-CC; FOXP coiled-coil domain
    cd20065
    Location:363 → 444
    FH_FOXP2; Forkhead (FH) domain found in Forkhead box protein P2 (FOXP2)

  30. XM_054682063.1 → XP_054538038.1  forkhead box protein P1 isoform X14

    UniProtKB/TrEMBL
    A0A2I3S7Z6

  31. XM_063806009.1 → XP_063662079.1  forkhead box protein P1 isoform X14

    UniProtKB/TrEMBL
    A0A2I3S7Z6

  32. XM_063806006.1 → XP_063662076.1  forkhead box protein P1 isoform X12

    UniProtKB/TrEMBL
    A0A2I3S7Z6

  33. XM_063806008.1 → XP_063662078.1  forkhead box protein P1 isoform X13

    UniProtKB/TrEMBL
    A0A2I3S7Z6

  34. XM_063806004.1 → XP_063662074.1  forkhead box protein P1 isoform X11

    UniProtKB/TrEMBL
    A0A2I3S7D8, A0A2I3S7Z6, A0A2J8P738, A0A6D2VSD8

  35. XM_003309883.5 → XP_003309931.1  forkhead box protein P1 isoform X15

    See identical proteins and their annotated locations for XP_003309931.1

    UniProtKB/TrEMBL
    A0A2I3RW51, A0A2J8P733, A0A6D2Y6X1
    Related
    ENSPTRP00000068534.1

  36. XM_063806010.1 → XP_063662080.1  forkhead box protein P1 isoform X15

    UniProtKB/TrEMBL
    A0A2I3RW51, A0A2J8P733, A0A6D2Y6X1

  37. XM_054682066.2 → XP_054538041.1  forkhead box protein P1 isoform X15

    UniProtKB/TrEMBL
    A0A2I3RW51, A0A2J8P733, A0A6D2Y6X1

RNA

  1. XR_010155275.1 RNA Sequence

  2. XR_010155274.1 RNA Sequence

  3. XR_010155273.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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