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RBM47 RNA binding motif protein 47 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 700732, updated on 5-Mar-2024

Summary

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Official Symbol
RBM47provided by VGNC
Official Full Name
RNA binding motif protein 47provided by VGNC
Primary source
VGNC:VGNC:76576
Locus tag
EGK_15671
See related
Ensembl:ENSMMUG00000012036
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
15
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 5 NC_041758.1 (39580725..39787837, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 5 NC_027897.1 (40183094..40393551, complement)

Chromosome 5 - NC_041758.1Genomic Context describing neighboring genes Neighboring gene cholinergic receptor nicotinic alpha 9 subunit Neighboring gene U7 small nuclear RNA Neighboring gene 60S ribosomal protein L37 pseudogene Neighboring gene 60S ribosomal protein L4 pseudogene Neighboring gene RNA-binding protein PNO1 Neighboring gene NOP2/Sun RNA methyltransferase family member 7

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
  2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RNA-binding protein 47

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041758.1 Reference Mmul_10 Primary Assembly

    Range
    39580725..39787837 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001095351.4 → XP_001095351.1  RNA-binding protein 47 isoform X1

    See identical proteins and their annotated locations for XP_001095351.1

    UniProtKB/TrEMBL
    A0A5F8AS32, A0A8J8Y7I0, G7MST1
    Related
    ENSMMUP00000080209.1, ENSMMUT00000106174.1
    Conserved Domains (1) summary
    TIGR01648
    Location:21 → 593
    hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family

  2. XM_001094904.4 → XP_001094904.1  RNA-binding protein 47 isoform X3

    See identical proteins and their annotated locations for XP_001094904.1

    Conserved Domains (1) summary
    TIGR01648
    Location:21 → 524
    hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family

  3. XM_001095125.4 → XP_001095125.1  RNA-binding protein 47 isoform X1

    See identical proteins and their annotated locations for XP_001095125.1

    UniProtKB/TrEMBL
    A0A5F8AS32, A0A8J8Y7I0, G7MST1
    Conserved Domains (1) summary
    TIGR01648
    Location:21 → 593
    hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family

  4. XM_028848403.1 → XP_028704236.1  RNA-binding protein 47 isoform X1

    UniProtKB/TrEMBL
    A0A5F8AS32, A0A8J8Y7I0, G7MST1
    Conserved Domains (1) summary
    TIGR01648
    Location:21 → 593
    hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family

  5. XM_028848404.1 → XP_028704237.1  RNA-binding protein 47 isoform X1

    UniProtKB/TrEMBL
    A0A5F8AS32, A0A8J8Y7I0, G7MST1
    Conserved Domains (1) summary
    TIGR01648
    Location:21 → 593
    hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family

  6. XM_015138227.2 → XP_014993713.1  RNA-binding protein 47 isoform X1

    UniProtKB/TrEMBL
    A0A5F8AS32, A0A8J8Y7I0, G7MST1
    Conserved Domains (1) summary
    TIGR01648
    Location:21 → 593
    hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family

  7. XM_015138228.2 → XP_014993714.1  RNA-binding protein 47 isoform X1

    UniProtKB/TrEMBL
    A0A5F8AS32, A0A8J8Y7I0, G7MST1
    Conserved Domains (1) summary
    TIGR01648
    Location:21 → 593
    hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family

  8. XM_028848405.1 → XP_028704238.1  RNA-binding protein 47 isoform X1

    UniProtKB/TrEMBL
    A0A5F8AS32, A0A8J8Y7I0, G7MST1
    Conserved Domains (1) summary
    TIGR01648
    Location:21 → 593
    hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family

  9. XM_015138229.2 → XP_014993715.1  RNA-binding protein 47 isoform X1

    UniProtKB/TrEMBL
    A0A5F8AS32, A0A8J8Y7I0, G7MST1
    Conserved Domains (1) summary
    TIGR01648
    Location:21 → 593
    hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family

  10. XM_028848406.1 → XP_028704239.1  RNA-binding protein 47 isoform X2

    UniProtKB/TrEMBL
    F7F3H5, F7GWI0, F7GWI1
    Related
    ENSMMUP00000015789.3, ENSMMUT00000016859.4
    Conserved Domains (1) summary
    TIGR01648
    Location:21 → 592
    hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family
Nucleotide Protein
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