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Cf2 Chorion factor 2 [ Drosophila willistoni ]

Gene ID: 6644013, updated on 24-May-2024

Summary

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Gene symbol
Cf2
Gene description
Chorion factor 2
Locus tag
Dwil_GK24592
See related
EnsemblRapid:LOC6644013
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila willistoni
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GK24592; GK24592-PB
Orthologs
fruit fly all
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Genomic context

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Location:
chromosome: 2R
Exon count:
4
Annotation release Status Assembly Chr Location
102 current UCI_dwil_1.1 (GCF_018902025.1) 2R Unlocalized Scaffold NW_025814050.1 (2947275..2952829)
101 previous assembly dwil_caf1 (GCF_000005925.1) Unplaced Scaffold NW_002032541.1 (1667621..1673047)

NW_025814050.1Genomic Context describing neighboring genes Neighboring gene transfer RNA aspartic acid (anticodon GUC) Neighboring gene serine/threonine-protein kinase RIO3 Neighboring gene G-protein coupled receptor 158 smog Neighboring gene vacuolar fusion protein MON1 homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chorion transcription factor Cf2
Names
Dwil\GK24592
Dwil\GK24592-PB
dwil_GLEANR_8728

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila willistoni Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCI_dwil_1.1

Genomic

  1. NW_025814050.1 Reference UCI_dwil_1.1

    Range
    2947275..2952829
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023176620.2 → XP_023032388.1  chorion transcription factor Cf2 isoform X1

    UniProtKB/TrEMBL
    B4N0J5
    Related
    XP_023032388.1, XM_023176620.2
    Conserved Domains (2) summary
    COG5048
    Location:362 → 500
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:400 → 420
    ZF_C2H2; C2H2 Zn finger [structural motif]

  2. XM_002066586.4 → XP_002066622.2  chorion transcription factor Cf2 isoform X1

    UniProtKB/TrEMBL
    B4N0J5
    Related
    XP_002066622.2, XM_002066586.4
    Conserved Domains (2) summary
    COG5048
    Location:362 → 500
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:400 → 420
    ZF_C2H2; C2H2 Zn finger [structural motif]

  3. XM_023176619.2 → XP_023032387.1  chorion transcription factor Cf2 isoform X1

    UniProtKB/TrEMBL
    B4N0J5
    Related
    XP_023032387.1, XM_023176619.2
    Conserved Domains (2) summary
    COG5048
    Location:362 → 500
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:400 → 420
    ZF_C2H2; C2H2 Zn finger [structural motif]

  4. XM_047010826.1 → XP_046866782.1  chorion transcription factor Cf2 isoform X1

    UniProtKB/TrEMBL
    B4N0J5
    Related
    XP_046866782.1, XM_047010826.1

  5. XM_023176622.2 → XP_023032390.1  chorion transcription factor Cf2 isoform X3

    Related
    XP_023032390.1, XM_023176622.2

  6. XM_023176621.2 → XP_023032389.1  chorion transcription factor Cf2 isoform X2

    Related
    XP_023032389.1, XM_023176621.2
    Conserved Domains (3) summary
    COG5048
    Location:363 → 470
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:400 → 420
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:440 → 465
    zf-H2C2_2; Zinc-finger double domain

  7. XM_023176623.2 → XP_023032391.1  chorion transcription factor Cf2 isoform X3

    Related
    XP_023032391.1, XM_023176623.2
Nucleotide Protein
Heading Accession and Version

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