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CLEC12B C-type lectin domain family 12 member B [ Canis lupus familiaris (dog) ]

Gene ID: 611402, updated on 17-Aug-2024

Summary

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Official Symbol
CLEC12Bprovided by VGNC
Official Full Name
C-type lectin domain family 12 member Bprovided by VGNC
Primary source
VGNC:VGNC:39326
See related
Ensembl:ENSCAFG00845027467
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 27
Exon count:
7
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 27 NC_051831.1 (36285169..36307769)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 27 NC_006609.4 (10662221..10684568, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 27 NC_049248.1 (10184037..10206287, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 27 NC_049768.1 (36195974..36218366)

Chromosome 27 - NC_051831.1Genomic Context describing neighboring genes Neighboring gene C-type lectin domain containing 7A Neighboring gene C-type lectin domain family 1 member A Neighboring gene C-type lectin domain family 1 member B Neighboring gene uncharacterized LOC106557878 Neighboring gene C-type lectin domain family 12 member A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein phosphatase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables signaling receptor regulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in natural killer cell inhibitory signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-type lectin domain family 12 member B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051831.1 Reference ROS_Cfam_1.0

    Range
    36285169..36307769
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038439029.1 → XP_038294957.1  C-type lectin domain family 12 member B isoform X2

    UniProtKB/TrEMBL
    A0A8C0K0C5
    Conserved Domains (1) summary
    cd03593
    Location:125 → 247
    CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)

  2. XM_038439030.1 → XP_038294958.1  C-type lectin domain family 12 member B isoform X3

    UniProtKB/TrEMBL
    A0A8C0K0C5, A0A8C0PBP0
    Conserved Domains (1) summary
    cd03593
    Location:144 → 237
    CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)

  3. XM_038439028.1 → XP_038294956.1  C-type lectin domain family 12 member B isoform X1

    UniProtKB/TrEMBL
    A0A8C0K0C5, A0A8C0PBP0, A0A8I3SAU5, A0A8P0SI29
    Related
    ENSCAFP00845037982.1, ENSCAFT00845048414.1
    Conserved Domains (1) summary
    cd03593
    Location:144 → 266
    CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049768.1 Alternate UNSW_CanFamBas_1.0

    Range
    36195974..36218366
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038641511.1 → XP_038497439.1  C-type lectin domain family 12 member B isoform X2

  2. XM_038641512.1 → XP_038497440.1  C-type lectin domain family 12 member B isoform X3

    Conserved Domains (1) summary
    cd03593
    Location:144 → 237
    CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)

  3. XM_038641510.1 → XP_038497438.1  C-type lectin domain family 12 member B isoform X1

    Conserved Domains (1) summary
    cd03593
    Location:144 → 266
    CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049248.1 Alternate UU_Cfam_GSD_1.0

    Range
    10184037..10206287 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038576769.1 → XP_038432697.1  C-type lectin domain family 12 member B isoform X2

    UniProtKB/TrEMBL
    A0A8C0PBP0

  2. XM_038576770.1 → XP_038432698.1  C-type lectin domain family 12 member B isoform X3

    UniProtKB/TrEMBL
    A0A8C0PBP0

  3. XM_038576768.1 → XP_038432696.1  C-type lectin domain family 12 member B isoform X1

    UniProtKB/TrEMBL
    A0A8C0PBP0

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006609.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    10662221..10684568 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038459809.1 → XP_038315737.1  C-type lectin domain family 12 member B isoform X2

    UniProtKB/TrEMBL
    A0A8C0K0C5
    Conserved Domains (1) summary
    cd03593
    Location:125 → 247
    CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)

  2. XM_022411026.2 → XP_022266734.1  C-type lectin domain family 12 member B isoform X3

    UniProtKB/TrEMBL
    A0A8C0K0C5, A0A8C0PBP0
    Conserved Domains (1) summary
    cd03593
    Location:144 → 237
    CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)

  3. XM_849067.5 → XP_854160.3  C-type lectin domain family 12 member B isoform X1

    UniProtKB/TrEMBL
    A0A8C0K0C5, A0A8C0PBP0, A0A8I3SAU5, A0A8P0SI29
    Conserved Domains (1) summary
    cd03593
    Location:144 → 266
    CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)
Nucleotide Protein
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