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POLD1 DNA polymerase delta 1, catalytic subunit [ Canis lupus familiaris (dog) ]

Gene ID: 610047, updated on 17-Aug-2024

Summary

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Official Symbol
POLD1provided by VGNC
Official Full Name
DNA polymerase delta 1, catalytic subunitprovided by VGNC
Primary source
VGNC:VGNC:44774
See related
Ensembl:ENSCAFG00845017219
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
28
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 1 NC_051805.1 (106813663..106842434, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 1 NC_006583.4 (105875694..105904437, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 1 NC_049222.1 (106967996..106996721, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 1 NC_049261.1 (106485820..106514537, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 1 NC_049742.1 (106127322..106156071, complement)

Chromosome 1 - NC_051805.1Genomic Context describing neighboring genes Neighboring gene myosin binding protein C2 Neighboring gene Spi-B transcription factor Neighboring gene nuclear receptor subfamily 1 group H member 2 Neighboring gene uncharacterized LOC119870938 Neighboring gene napsin A aspartic peptidase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3'-5'-DNA exonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-directed DNA polymerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleotide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA replication proofreading IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in DNA-templated DNA replication IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in base-excision repair, gap-filling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nucleotide-excision repair, DNA gap filling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of delta DNA polymerase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA polymerase delta catalytic subunit
Names
DAN polymerase delta 1, catalytic subunit
polymerase (DNA directed), delta 1, catalytic subunit 125kDa
XP_022279048.2
XP_038323327.1
XP_038323328.1
XP_038384025.1
XP_038384026.1
XP_038448322.1
XP_038448323.1
XP_038512114.1
XP_038512115.1
XP_038519133.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051805.1 Reference ROS_Cfam_1.0

    Range
    106813663..106842434 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038656187.1 → XP_038512115.1  DNA polymerase delta catalytic subunit isoform X2

    UniProtKB/TrEMBL
    A0A8C0LXV5
    Conserved Domains (1) summary
    PTZ00166
    Location:94 → 1076
    PTZ00166; DNA polymerase delta catalytic subunit; Provisional

  2. XM_038656186.1 → XP_038512114.1  DNA polymerase delta catalytic subunit isoform X1

    UniProtKB/TrEMBL
    A0A8C0SDC7
    Related
    ENSCAFT00845030468.1
    Conserved Domains (1) summary
    PTZ00166
    Location:94 → 1113
    PTZ00166; DNA polymerase delta catalytic subunit; Provisional

RNA

  1. XR_005422074.1 RNA Sequence

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049261.1 Alternate UMICH_Zoey_3.1

    Range
    106485820..106514537 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038467400.1 → XP_038323328.1  DNA polymerase delta catalytic subunit isoform X2

    Conserved Domains (1) summary
    PTZ00166
    Location:94 → 1076
    PTZ00166; DNA polymerase delta catalytic subunit; Provisional

  2. XM_038467399.1 → XP_038323327.1  DNA polymerase delta catalytic subunit isoform X1

    Conserved Domains (1) summary
    PTZ00166
    Location:94 → 1113
    PTZ00166; DNA polymerase delta catalytic subunit; Provisional

RNA

  1. XR_005320871.1 RNA Sequence

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049742.1 Alternate UNSW_CanFamBas_1.0

    Range
    106127322..106156071 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038592395.1 → XP_038448323.1  DNA polymerase delta catalytic subunit isoform X2

    Conserved Domains (1) summary
    PTZ00166
    Location:94 → 1076
    PTZ00166; DNA polymerase delta catalytic subunit; Provisional

  2. XM_038592394.1 → XP_038448322.1  DNA polymerase delta catalytic subunit isoform X1

    Conserved Domains (1) summary
    PTZ00166
    Location:94 → 1113
    PTZ00166; DNA polymerase delta catalytic subunit; Provisional

RNA

  1. XR_005389086.1 RNA Sequence

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049222.1 Alternate UU_Cfam_GSD_1.0

    Range
    106967996..106996721 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038528098.1 → XP_038384026.1  DNA polymerase delta catalytic subunit isoform X2

    UniProtKB/TrEMBL
    A0A8C0LXV5
    Conserved Domains (1) summary
    PTZ00166
    Location:94 → 1076
    PTZ00166; DNA polymerase delta catalytic subunit; Provisional

  2. XM_038528097.1 → XP_038384025.1  DNA polymerase delta catalytic subunit isoform X1

    UniProtKB/TrEMBL
    A0A8C0SDC7
    Conserved Domains (1) summary
    PTZ00166
    Location:94 → 1113
    PTZ00166; DNA polymerase delta catalytic subunit; Provisional

RNA

  1. XR_005354508.1 RNA Sequence

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006583.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    105875694..105904437 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038663205.1 → XP_038519133.1  DNA polymerase delta catalytic subunit isoform X2

    UniProtKB/TrEMBL
    A0A8C0LXV5
    Conserved Domains (1) summary
    PTZ00166
    Location:94 → 1076
    PTZ00166; DNA polymerase delta catalytic subunit; Provisional

  2. XM_022423340.2 → XP_022279048.2  DNA polymerase delta catalytic subunit isoform X1

    UniProtKB/TrEMBL
    A0A8C0SDC7
    Conserved Domains (1) summary
    PTZ00166
    Location:94 → 1113
    PTZ00166; DNA polymerase delta catalytic subunit; Provisional

RNA

  1. XR_002630123.2 RNA Sequence

Nucleotide Protein
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