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KIAA1143 KIAA1143 [ Homo sapiens (human) ]

Gene ID: 57456, updated on 24-Nov-2020

Summary

Official Symbol
KIAA1143provided by HGNC
Official Full Name
KIAA1143provided by HGNC
Primary source
HGNC:HGNC:29198
See related
Ensembl:ENSG00000163807
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Ubiquitous expression in ovary (RPKM 11.8), thyroid (RPKM 10.6) and 25 other tissues See more
Orthologs

Genomic context

See KIAA1143 in Genome Data Viewer
Location:
3p21.31
Exon count:
3
Annotation release Status Assembly Chr Location
109.20201120 current GRCh38.p13 (GCF_000001405.39) 3 NC_000003.12 (44748744..44761619, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (44790236..44803173, complement)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105377056 Neighboring gene zinc finger protein 502 Neighboring gene zinc finger protein 501 Neighboring gene kinesin family member 15 Neighboring gene heterogeneous nuclear ribonucleoprotein A1 pseudogene 77 Neighboring gene microRNA 564 Neighboring gene transmembrane protein 42

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 

General protein information

Preferred Names
uncharacterized protein KIAA1143

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001320334.2NP_001307263.1  uncharacterized protein KIAA1143 isoform 2

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) contains an alternate 3' terminal exon, resulting in a distinct 3' coding region and 3' UTR, compared to variant 1. The encoded isoform (2) has a distinct C-terminus and is shorter than isoform 1.
    Source sequence(s)
    AC098649, BU741967, CD049061, DB238094
    Conserved Domains (1) summary
    pfam15377
    Location:584
    DUF4604; Domain of unknown function (DUF4604)
  2. NM_020696.4NP_065747.1  uncharacterized protein KIAA1143 isoform 1

    See identical proteins and their annotated locations for NP_065747.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1).
    Source sequence(s)
    AC098649, BC008468, BU741967, DA192476
    Consensus CDS
    CCDS2721.1
    UniProtKB/Swiss-Prot
    Q96AT1
    UniProtKB/TrEMBL
    A0A024R2T2
    Related
    ENSP00000296121.4, ENST00000296121.6
    Conserved Domains (1) summary
    pfam15377
    Location:5150
    DUF4604; Domain of unknown function (DUF4604)

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20201120

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p13 Primary Assembly

    Range
    44748744..44761619 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p13 PATCHES

Genomic

  1. NW_009646197.1 Reference GRCh38.p13 PATCHES

    Range
    274094..286969 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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