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ZNF248 zinc finger protein 248 [ Homo sapiens (human) ]

Gene ID: 57209, updated on 3-Nov-2024

Summary

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Official Symbol
ZNF248provided by HGNC
Official Full Name
zinc finger protein 248provided by HGNC
Primary source
HGNC:HGNC:13041
See related
Ensembl:ENSG00000198105 AllianceGenome:HGNC:13041
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
bA162G10.3
Summary
Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. [provided by Alliance of Genome Resources, Nov 2024]
Expression
Ubiquitous expression in endometrium (RPKM 2.8), thyroid (RPKM 2.7) and 24 other tissues See more
Orthologs
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Genomic context

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See ZNF248 in Genome Data Viewer
Location:
10p11.21
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (37758538..37858103, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (37802500..37902073, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (38047466..38147031, complement)

Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102724533 Neighboring gene uncharacterized LOC105376498 Neighboring gene zinc finger protein 33B pseudogene 1 Neighboring gene tousled like kinase 2 pseudogene 2 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3270 Neighboring gene ReSE screen-validated silencer GRCh37_chr10:38146408-38146784 Neighboring gene ZNF248 antisense RNA 1 Neighboring gene uncharacterized LOC124902413 Neighboring gene zinc finger protein 37C, pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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Related articles in PubMed

  1. Gene-based analysis identified the gene ZNF248 is associated with late-onset asthma in African Americans. Wang L, et al. Ann Allergy Asthma Immunol, 2016 Jul. PMID 27238579, Free PMC Article
  2. Genomic sequence and transcriptional profile of the boundary between pericentromeric satellites and genes on human chromosome arm 10p. Guy J, et al. Genome Res, 2003 Feb. PMID 12566394, Free PMC Article
  3. Common body mass index-associated variants confer risk of extreme obesity. Cotsapas C, et al. Hum Mol Genet, 2009 Sep 15. PMID 19553259, Free PMC Article
  4. A scan of chromosome 10 identifies a novel locus showing strong association with late-onset Alzheimer disease. Grupe A, et al. Am J Hum Genet, 2006 Jan. PMID 16385451, Free PMC Article
  5. Genome-wide CRISPR screen identifies HNRNPL as a prostate cancer dependency regulating RNA splicing. Fei T, et al. Proc Natl Acad Sci U S A, 2017 Jun 27. PMID 28611215, Free PMC Article

See all (14) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Smoking and obesity are risk factors for LOA. ZNF248 confers increased susceptibility to LOA in African Americans.
    Title: Gene-based analysis identified the gene ZNF248 is associated with late-onset asthma in African Americans.
  2. Observational study of gene-disease association. (HuGE Navigator)
    Title: A scan of chromosome 10 identifies a novel locus showing strong association with late-onset Alzheimer disease.
Submit: New GeneRIF Correction

Phenotypes

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Find tests for this gene in the NIH Genetic Testing Registry (GTR)

Review eQTL and phenotype association data in this region using PheGenI

EBI GWAS Catalog

Description
Common body mass index-associated variants confer risk of extreme obesity.
EBI GWAS Catalog

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Genotypes

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Clone Names

  • KIAA0137, MGC131882

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IBA
Inferred from Biological aspect of Ancestor
more info
  
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
zinc finger protein 248
Names
KRAB protein domain
Kruppel-type zinc finger protein
bA162G10.3 (zinc finger protein)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001267597.2 → NP_001254526.1  zinc finger protein 248 isoform 1

    See identical proteins and their annotated locations for NP_001254526.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) differs in the 5' UTR, compared to variant 1. Variants 1, 2, and 6-11 all encode the same isoform (1).
    Source sequence(s)
    AA836603, AJ491695, AK299357, AL135791
    Consensus CDS
    CCDS7194.1
    UniProtKB/Swiss-Prot
    Q8NDV8, Q8NDW4, Q9UMP3
    UniProtKB/TrEMBL
    A2RUI7
    Related
    ENSP00000349882.4, ENST00000357328.8
    Conserved Domains (3) summary
    smart00349
    Location:8 → 68
    KRAB; krueppel associated box
    COG5048
    Location:406 → 472
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:494 → 514
    ZF_C2H2; C2H2 Zn finger [structural motif]

  2. NM_001267605.2 → NP_001254534.1  zinc finger protein 248 isoform 2

    See identical proteins and their annotated locations for NP_001254534.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3) lacks a segment in the 3' region, compared to variant 1. The resulting isoform (2) is shorter and has a distinct C-terminus, compared to isoform 1. Variants 3, 4, and 13-17 all encode the same isoform (2).
    Source sequence(s)
    AA836603, AJ491695, AJ492196, AL135791, DB073240
    Consensus CDS
    CCDS58077.1
    UniProtKB/TrEMBL
    Q05CR2
    Related
    ENSP00000363778.3, ENST00000374648.7
    Conserved Domains (1) summary
    smart00349
    Location:8 → 68
    KRAB; krueppel associated box

  3. NM_001267606.2 → NP_001254535.1  zinc finger protein 248 isoform 2

    See identical proteins and their annotated locations for NP_001254535.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (4) has additional segments in the 5' UTR and lacks a segment in the 3' region, compared to variant 1. The resulting isoform (2) is shorter and has a distinct C-terminus, compared to isoform 1. Variants 3, 4, and 13-17 all encode the same isoform (2).
    Source sequence(s)
    AA836603, AJ491695, AL135791, BC110869
    Consensus CDS
    CCDS58077.1
    UniProtKB/TrEMBL
    Q05CR2
    Related
    ENSP00000484191.1, ENST00000611278.4
    Conserved Domains (1) summary
    smart00349
    Location:8 → 68
    KRAB; krueppel associated box

  4. NM_001267607.3 → NP_001254536.1  zinc finger protein 248 isoform 3

    Status: VALIDATED

    Description
    Transcript Variant: This variant (5) differs in the 3' coding region and 3' UTR, compared to variant 1. The resulting isoform (3) is shorter and has a distinct C-terminus, compared to isoform 1. Variants 5 and 12 both encode the same isoform (3).
    Source sequence(s)
    AL132657, AL135791
    Consensus CDS
    CCDS73087.1
    UniProtKB/TrEMBL
    A0A087WTK3, Q05CR2
    Related
    ENSP00000477940.1, ENST00000615949.6
    Conserved Domains (1) summary
    smart00349
    Location:8 → 68
    KRAB; krueppel associated box

  5. NM_001352469.2 → NP_001339398.1  zinc finger protein 248 isoform 1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (6), as well as variants 1, 2, and 7-11, encodes isoform 1.
    Source sequence(s)
    AL135791
    Consensus CDS
    CCDS7194.1
    UniProtKB/Swiss-Prot
    Q8NDV8, Q8NDW4, Q9UMP3
    UniProtKB/TrEMBL
    A2RUI7
    Conserved Domains (3) summary
    smart00349
    Location:8 → 68
    KRAB; krueppel associated box
    COG5048
    Location:406 → 472
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:494 → 514
    ZF_C2H2; C2H2 Zn finger [structural motif]

  6. NM_001352470.2 → NP_001339399.1  zinc finger protein 248 isoform 1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (7), as well as variants 1, 2, 6, and 8-11, encodes isoform 1.
    Source sequence(s)
    AL135791
    Consensus CDS
    CCDS7194.1
    UniProtKB/Swiss-Prot
    Q8NDV8, Q8NDW4, Q9UMP3
    UniProtKB/TrEMBL
    A2RUI7
    Conserved Domains (3) summary
    smart00349
    Location:8 → 68
    KRAB; krueppel associated box
    COG5048
    Location:406 → 472
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:494 → 514
    ZF_C2H2; C2H2 Zn finger [structural motif]

  7. NM_001352471.2 → NP_001339400.1  zinc finger protein 248 isoform 1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (8), as well as variants 1, 2, 6, 7, and 9-11, encodes isoform 1.
    Source sequence(s)
    AL135791
    Consensus CDS
    CCDS7194.1
    UniProtKB/Swiss-Prot
    Q8NDV8, Q8NDW4, Q9UMP3
    UniProtKB/TrEMBL
    A2RUI7
    Conserved Domains (3) summary
    smart00349
    Location:8 → 68
    KRAB; krueppel associated box
    COG5048
    Location:406 → 472
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:494 → 514
    ZF_C2H2; C2H2 Zn finger [structural motif]

  8. NM_001352472.2 → NP_001339401.1  zinc finger protein 248 isoform 1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (9), as well as variants 1, 2, 6-8, 10, and 11, encodes isoform 1.
    Source sequence(s)
    AL135791
    Consensus CDS
    CCDS7194.1
    UniProtKB/Swiss-Prot
    Q8NDV8, Q8NDW4, Q9UMP3
    UniProtKB/TrEMBL
    A2RUI7
    Conserved Domains (3) summary
    smart00349
    Location:8 → 68
    KRAB; krueppel associated box
    COG5048
    Location:406 → 472
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:494 → 514
    ZF_C2H2; C2H2 Zn finger [structural motif]

  9. NM_001352473.2 → NP_001339402.1  zinc finger protein 248 isoform 1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (10), as well as variants 1, 2, 6-9, and 11, encodes isoform 1.
    Source sequence(s)
    AL135791
    Consensus CDS
    CCDS7194.1
    UniProtKB/Swiss-Prot
    Q8NDV8, Q8NDW4, Q9UMP3
    UniProtKB/TrEMBL
    A2RUI7
    Conserved Domains (3) summary
    smart00349
    Location:8 → 68
    KRAB; krueppel associated box
    COG5048
    Location:406 → 472
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:494 → 514
    ZF_C2H2; C2H2 Zn finger [structural motif]

  10. NM_001352474.2 → NP_001339403.1  zinc finger protein 248 isoform 1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (11), as well as variants 1, 2, and 6-10, encodes isoform 1.
    Source sequence(s)
    AL135791
    Consensus CDS
    CCDS7194.1
    UniProtKB/Swiss-Prot
    Q8NDV8, Q8NDW4, Q9UMP3
    UniProtKB/TrEMBL
    A2RUI7
    Conserved Domains (3) summary
    smart00349
    Location:8 → 68
    KRAB; krueppel associated box
    COG5048
    Location:406 → 472
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:494 → 514
    ZF_C2H2; C2H2 Zn finger [structural motif]

  11. NM_001352476.2 → NP_001339405.1  zinc finger protein 248 isoform 3

    Status: VALIDATED

    Description
    Transcript Variant: This variant (12), as well as variant 5, encodes isoform 3.
    Source sequence(s)
    AL132657, AL135791
    Consensus CDS
    CCDS73087.1
    UniProtKB/TrEMBL
    A0A087WTK3, Q05CR2
    Conserved Domains (1) summary
    smart00349
    Location:8 → 68
    KRAB; krueppel associated box

  12. NM_001352477.2 → NP_001339406.1  zinc finger protein 248 isoform 2

    Status: VALIDATED

    Description
    Transcript Variant: This variant (13), as well as variants 3, 4, and 14-17, encodes isoform 2.
    Source sequence(s)
    AL135791
    Consensus CDS
    CCDS58077.1
    UniProtKB/TrEMBL
    Q05CR2
    Conserved Domains (1) summary
    smart00349
    Location:8 → 68
    KRAB; krueppel associated box

  13. NM_001352478.2 → NP_001339407.1  zinc finger protein 248 isoform 2

    Status: VALIDATED

    Description
    Transcript Variant: This variant (14), as well as variants 3, 4, 13, and 15-17, encodes isoform 2.
    Source sequence(s)
    AL135791
    Consensus CDS
    CCDS58077.1
    UniProtKB/TrEMBL
    Q05CR2
    Conserved Domains (1) summary
    smart00349
    Location:8 → 68
    KRAB; krueppel associated box

  14. NM_001352479.2 → NP_001339408.1  zinc finger protein 248 isoform 2

    Status: VALIDATED

    Description
    Transcript Variant: This variant (15), as well as variants 3, 4, 13, 14, 16, and 17, encodes isoform 2.
    Source sequence(s)
    AL135791
    Consensus CDS
    CCDS58077.1
    UniProtKB/TrEMBL
    Q05CR2
    Conserved Domains (1) summary
    smart00349
    Location:8 → 68
    KRAB; krueppel associated box

  15. NM_001352480.2 → NP_001339409.1  zinc finger protein 248 isoform 2

    Status: VALIDATED

    Description
    Transcript Variant: This variant (16), as well as variants 3, 4, 13-15, and 17, encodes isoform 2.
    Source sequence(s)
    AL135791
    Consensus CDS
    CCDS58077.1
    UniProtKB/TrEMBL
    Q05CR2
    Conserved Domains (1) summary
    smart00349
    Location:8 → 68
    KRAB; krueppel associated box

  16. NM_001352481.2 → NP_001339410.1  zinc finger protein 248 isoform 2

    Status: VALIDATED

    Description
    Transcript Variant: This variant (17), as well as variants 3, 4, and 13-16, encodes isoform 2.
    Source sequence(s)
    AL135791
    Consensus CDS
    CCDS58077.1
    UniProtKB/TrEMBL
    Q05CR2
    Conserved Domains (1) summary
    smart00349
    Location:8 → 68
    KRAB; krueppel associated box

  17. NM_001352482.2 → NP_001339411.1  zinc finger protein 248 isoform 4

    Status: VALIDATED

    Description
    Transcript Variant: This variant (18), as well as variants 19-28, encodes isoform 4.
    Source sequence(s)
    AL135791
    Conserved Domains (2) summary
    COG5048
    Location:262 → 328
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:350 → 370
    ZF_C2H2; C2H2 Zn finger [structural motif]

  18. NM_001352483.1 → NP_001339412.1  zinc finger protein 248 isoform 4

    Status: VALIDATED

    Source sequence(s)
    AL135791
    Conserved Domains (2) summary
    COG5048
    Location:262 → 328
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:350 → 370
    ZF_C2H2; C2H2 Zn finger [structural motif]

  19. NM_001352484.2 → NP_001339413.1  zinc finger protein 248 isoform 4

    Status: VALIDATED

    Description
    Transcript Variant: This variant (20), as well as variants 18, 19, and 21-28, encodes isoform 4.
    Source sequence(s)
    AL135791
    Conserved Domains (2) summary
    COG5048
    Location:262 → 328
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:350 → 370
    ZF_C2H2; C2H2 Zn finger [structural motif]

  20. NM_001352485.1 → NP_001339414.1  zinc finger protein 248 isoform 4

    Status: VALIDATED

    Description
    Transcript Variant: This variant (21), as well as variants 18-20 and 22-28, encodes isoform 4.
    Source sequence(s)
    AL135791
    Conserved Domains (2) summary
    COG5048
    Location:262 → 328
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:350 → 370
    ZF_C2H2; C2H2 Zn finger [structural motif]

  21. NM_001352486.2 → NP_001339415.1  zinc finger protein 248 isoform 4

    Status: VALIDATED

    Description
    Transcript Variant: This variant (22), as well as variants 18-21 and 23-28, encodes isoform 4.
    Source sequence(s)
    AL135791
    Conserved Domains (2) summary
    COG5048
    Location:262 → 328
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:350 → 370
    ZF_C2H2; C2H2 Zn finger [structural motif]

  22. NM_001352487.2 → NP_001339416.1  zinc finger protein 248 isoform 4

    Status: VALIDATED

    Description
    Transcript Variant: This variant (23), as well as variants 18-22 and 24-28, encodes isoform 4.
    Source sequence(s)
    AL135791
    Conserved Domains (2) summary
    COG5048
    Location:262 → 328
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:350 → 370
    ZF_C2H2; C2H2 Zn finger [structural motif]

  23. NM_001352488.2 → NP_001339417.1  zinc finger protein 248 isoform 4

    Status: VALIDATED

    Description
    Transcript Variant: This variant (24), as well as variants 18-23 and 25-28, encodes isoform 4.
    Source sequence(s)
    AL135791
    Conserved Domains (2) summary
    COG5048
    Location:262 → 328
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:350 → 370
    ZF_C2H2; C2H2 Zn finger [structural motif]

  24. NM_001352489.2 → NP_001339418.1  zinc finger protein 248 isoform 4

    Status: VALIDATED

    Description
    Transcript Variant: This variant (25), as well as variants 18-24 and 26-28, encodes isoform 4.
    Source sequence(s)
    AL135791
    Conserved Domains (2) summary
    COG5048
    Location:262 → 328
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:350 → 370
    ZF_C2H2; C2H2 Zn finger [structural motif]

  25. NM_001352490.2 → NP_001339419.1  zinc finger protein 248 isoform 4

    Status: VALIDATED

    Description
    Transcript Variant: This variant (26), as well as variants 18-25, 27, and 28, encodes isoform 4.
    Source sequence(s)
    AL135791
    Conserved Domains (2) summary
    COG5048
    Location:262 → 328
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:350 → 370
    ZF_C2H2; C2H2 Zn finger [structural motif]

  26. NM_001352491.2 → NP_001339420.1  zinc finger protein 248 isoform 4

    Status: VALIDATED

    Description
    Transcript Variant: This variant (27), as well as variants 18-26 and 28, encodes isoform 4.
    Source sequence(s)
    AL135791
    Conserved Domains (2) summary
    COG5048
    Location:262 → 328
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:350 → 370
    ZF_C2H2; C2H2 Zn finger [structural motif]

  27. NM_001352492.2 → NP_001339421.1  zinc finger protein 248 isoform 4

    Status: VALIDATED

    Description
    Transcript Variant: This variant (28), as well as variants 18-27, encodes isoform 4.
    Source sequence(s)
    AL135791
    Conserved Domains (2) summary
    COG5048
    Location:262 → 328
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:350 → 370
    ZF_C2H2; C2H2 Zn finger [structural motif]

  28. NM_001352493.2 → NP_001339422.1  zinc finger protein 248 isoform 5

    Status: VALIDATED

    Description
    Transcript Variant: This variant (29), as well as variant 30, encodes isoform 5.
    Source sequence(s)
    AL132657, AL135791
    Consensus CDS
    CCDS86083.1
    UniProtKB/TrEMBL
    Q05CR2, S4R340
    Conserved Domains (1) summary
    smart00349
    Location:8 → 68
    KRAB; krueppel associated box

  29. NM_001352494.2 → NP_001339423.1  zinc finger protein 248 isoform 5

    Status: VALIDATED

    Description
    Transcript Variant: This variant (30), as well as variant 29, encodes isoform 5.
    Source sequence(s)
    AL132657, AL135791
    Consensus CDS
    CCDS86083.1
    UniProtKB/TrEMBL
    Q05CR2, S4R340
    Conserved Domains (1) summary
    smart00349
    Location:8 → 68
    KRAB; krueppel associated box

  30. NM_021045.3 → NP_066383.1  zinc finger protein 248 isoform 1

    See identical proteins and their annotated locations for NP_066383.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) encodes the longest isoform (1). Variants 1, 2, and 6-11 all encode the same isoform (1).
    Source sequence(s)
    AA836603, AJ491695, AL135791, DB073240
    Consensus CDS
    CCDS7194.1
    UniProtKB/Swiss-Prot
    Q8NDV8, Q8NDW4, Q9UMP3
    UniProtKB/TrEMBL
    A2RUI7
    Related
    ENSP00000379208.3, ENST00000395867.8
    Conserved Domains (3) summary
    smart00349
    Location:8 → 68
    KRAB; krueppel associated box
    COG5048
    Location:406 → 472
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:494 → 514
    ZF_C2H2; C2H2 Zn finger [structural motif]

RNA

  1. NR_147991.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL135791

  2. NR_147992.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL132657, AL135791

  3. NR_147993.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL132657, AL135791

  4. NR_147994.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL132657, AL135791

  5. NR_147995.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL132657, AL135791

  6. NR_147996.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL135791

  7. NR_147997.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL132657, AL135791

  8. NR_147998.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL132657, AL135791

  9. NR_147999.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL132657, AL135791

  10. NR_148000.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL132657, AL135791

  11. NR_148001.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL132657, AL135791

  12. NR_148002.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL132657, AL135791

  13. NR_148003.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL135791

  14. NR_148004.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL132657, AL135791

  15. NR_148005.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL135791

  16. NR_148006.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL132657, AL135791

  17. NR_148007.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL132657, AL135791

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

    Range
    37758538..37858103 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017016448.2 → XP_016871937.1  zinc finger protein 248 isoform X2

  2. XM_047425550.1 → XP_047281506.1  zinc finger protein 248 isoform X4

    UniProtKB/TrEMBL
    S4R340
    Related
    ENSP00000473904.1, ENST00000485560.5

  3. XM_047425549.1 → XP_047281505.1  zinc finger protein 248 isoform X4

    UniProtKB/TrEMBL
    S4R340

  4. XM_047425546.1 → XP_047281502.1  zinc finger protein 248 isoform X3

  5. XM_047425544.1 → XP_047281500.1  zinc finger protein 248 isoform X1

    UniProtKB/Swiss-Prot
    Q8NDV8, Q8NDW4, Q9UMP3
    UniProtKB/TrEMBL
    A2RUI7

  6. XM_047425548.1 → XP_047281504.1  zinc finger protein 248 isoform X3

    Related
    ENSP00000379214.3, ENST00000395873.7

  7. XM_047425545.1 → XP_047281501.1  zinc finger protein 248 isoform X1

    UniProtKB/Swiss-Prot
    Q8NDV8, Q8NDW4, Q9UMP3
    UniProtKB/TrEMBL
    A2RUI7

  8. XM_011519599.2 → XP_011517901.1  zinc finger protein 248 isoform X3

    See identical proteins and their annotated locations for XP_011517901.1

    UniProtKB/TrEMBL
    Q05CR2
    Conserved Domains (1) summary
    smart00349
    Location:8 → 68
    KRAB; krueppel associated box

  9. XM_047425547.1 → XP_047281503.1  zinc finger protein 248 isoform X3

  10. XM_017016445.2 → XP_016871934.1  zinc finger protein 248 isoform X1

    UniProtKB/Swiss-Prot
    Q8NDV8, Q8NDW4, Q9UMP3
    UniProtKB/TrEMBL
    A2RUI7
    Conserved Domains (3) summary
    smart00349
    Location:8 → 68
    KRAB; krueppel associated box
    COG5048
    Location:406 → 472
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:494 → 514
    ZF_C2H2; C2H2 Zn finger [structural motif]

RNA

  1. XR_001747152.2 RNA Sequence

  2. XR_001747150.2 RNA Sequence

  3. XR_001747148.2 RNA Sequence

  4. XR_001747156.2 RNA Sequence

  5. XR_001747146.2 RNA Sequence

  6. XR_001747153.2 RNA Sequence

  7. XR_001747149.2 RNA Sequence

  8. XR_001747147.2 RNA Sequence

  9. XR_007061976.1 RNA Sequence

  10. XR_007061977.1 RNA Sequence

  11. XR_001747155.2 RNA Sequence

  12. XR_007061975.1 RNA Sequence

  13. XR_007061974.1 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060934.1 Alternate T2T-CHM13v2.0

    Range
    37802500..37902073 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054366390.1 → XP_054222365.1  zinc finger protein 248 isoform X2

  2. XM_054366395.1 → XP_054222370.1  zinc finger protein 248 isoform X4

    UniProtKB/TrEMBL
    S4R340

  3. XM_054366394.1 → XP_054222369.1  zinc finger protein 248 isoform X4

    UniProtKB/TrEMBL
    S4R340

  4. XM_054366393.1 → XP_054222368.1  zinc finger protein 248 isoform X3

  5. XM_054366389.1 → XP_054222364.1  zinc finger protein 248 isoform X1

    UniProtKB/Swiss-Prot
    Q8NDV8, Q8NDW4, Q9UMP3
    UniProtKB/TrEMBL
    A2RUI7

  6. XM_054366392.1 → XP_054222367.1  zinc finger protein 248 isoform X3

  7. XM_054366391.1 → XP_054222366.1  zinc finger protein 248 isoform X3

  8. XM_054366388.1 → XP_054222363.1  zinc finger protein 248 isoform X1

    UniProtKB/Swiss-Prot
    Q8NDV8, Q8NDW4, Q9UMP3
    UniProtKB/TrEMBL
    A2RUI7

RNA

  1. XR_008488237.1 RNA Sequence

  2. XR_008488234.1 RNA Sequence

  3. XR_008488233.1 RNA Sequence

  4. XR_008488239.1 RNA Sequence

  5. XR_008488230.1 RNA Sequence

  6. XR_008488236.1 RNA Sequence

  7. XR_008488238.1 RNA Sequence

  8. XR_008488235.1 RNA Sequence

  9. XR_008488232.1 RNA Sequence

  10. XR_008488241.1 RNA Sequence

  11. XR_008488242.1 RNA Sequence

  12. XR_008488231.1 RNA Sequence

  13. XR_008488240.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8NDW4.1 GenPept UniProtKB/Swiss-Prot:Q8NDW4

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