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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001281528.2 → NP_001268457.1 proteasome activator complex subunit 1 isoform 3
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) uses an alternate splice site in the 3' coding region, which results in a frameshift, compared to variant 1. It encodes isoform 3, which has a shorter and distinct C-terminus, compared to isoform 1.
- Source sequence(s)
-
BJ993879, BM981616, BU192084
- Consensus CDS
-
CCDS61415.1
- UniProtKB/TrEMBL
-
Q6FHU3
- Related
- ENSP00000453976.1, ENST00000561435.5
- Conserved Domains (2) summary
-
- pfam02251
Location:10 → 67
- PA28_alpha; Proteasome activator pa28 alpha subunit
- pfam02252
Location:103 → 223
- PA28_beta; Proteasome activator pa28 beta subunit
-
NM_001281529.2 → NP_001268458.1 proteasome activator complex subunit 1 isoform 4
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) uses an alternate in-frame splice site in the 3' coding region compared to variant 1. It encodes isoform 4 which is shorter compared to isoform 1.
- Source sequence(s)
-
AI445328, BJ993879, BM470561, BM981616
- UniProtKB/TrEMBL
-
Q6FHU3
- Conserved Domains (2) summary
-
- pfam02251
Location:10 → 67
- PA28_alpha; Proteasome activator pa28 alpha subunit
- pfam02252
Location:106 → 234
- PA28_beta; Proteasome activator pa28 beta subunit
-
NM_006263.4 → NP_006254.1 proteasome activator complex subunit 1 isoform 1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes isoform 1.
- Source sequence(s)
-
BM981616, L07633
- Consensus CDS
-
CCDS9612.1
- UniProtKB/Swiss-Prot
- A6NJG9, H0YNE3, Q06323, Q6IBM2, Q9UEF4
- UniProtKB/TrEMBL
- A0A0K0K1L8, Q6FHU3
- Related
- ENSP00000206451.6, ENST00000206451.11
- Conserved Domains (2) summary
-
- pfam02251
Location:8 → 68
- PA28_alpha; Proteasome activator pa28 alpha subunit
- pfam02252
Location:104 → 246
- PA28_beta; Proteasome activator pa28 beta subunit
-
NM_176783.3 → NP_788955.1 proteasome activator complex subunit 1 isoform 2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) contains an alternate 3' structure, and thus differs in the 3' coding region and 3' UTR, compared to variant 1. The encoded isoform (3) has a distinct and longer C-terminus, compared to isoform 1.
- Source sequence(s)
-
BJ993879, BM981616, BQ060125, BX248293
- Consensus CDS
-
CCDS41930.1
- UniProtKB/TrEMBL
-
Q6FHU3
- Related
- ENSP00000372155.3, ENST00000382708.7
- Conserved Domains (2) summary
-
- pfam02251
Location:10 → 67
- PA28_alpha; Proteasome activator pa28 alpha subunit
- pfam02252
Location:106 → 223
- PA28_beta; Proteasome activator pa28 beta subunit
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000014.9 Reference GRCh38.p14 Primary Assembly
- Range
-
24136194..24138962
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Reference GRCh38.p14 PATCHES
Genomic
-
NW_018654722.1 Reference GRCh38.p14 PATCHES
- Range
-
437172..439940
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate T2T-CHM13v2.0
Genomic
-
NC_060938.1 Alternate T2T-CHM13v2.0
- Range
-
18334505..18337273
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)