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MAPK6 mitogen-activated protein kinase 6 [ Homo sapiens (human) ]

Gene ID: 5597, updated on 13-Mar-2020

Summary

Official Symbol
MAPK6provided by HGNC
Official Full Name
mitogen-activated protein kinase 6provided by HGNC
Primary source
HGNC:HGNC:6879
See related
Ensembl:ENSG00000069956 MIM:602904
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
ERK3; PRKM6; p97MAPK; HsT17250
Summary
The protein encoded by this gene is a member of the Ser/Thr protein kinase family, and is most closely related to mitogen-activated protein kinases (MAP kinases). MAP kinases also known as extracellular signal-regulated kinases (ERKs), are activated through protein phosphorylation cascades and act as integration points for multiple biochemical signals. This kinase is localized in the nucleus, and has been reported to be activated in fibroblasts upon treatment with serum or phorbol esters. [provided by RefSeq, Jul 2008]
Expression
Ubiquitous expression in testis (RPKM 25.2), brain (RPKM 20.8) and 25 other tissues See more
Orthologs

Genomic context

See MAPK6 in Genome Data Viewer
Location:
15q21.2
Exon count:
8
Annotation release Status Assembly Chr Location
109.20200228 current GRCh38.p13 (GCF_000001405.39) 15 NC_000015.10 (52019219..52067375)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 15 NC_000015.9 (52296377..52358462)

Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112268148 Neighboring gene LEO1 homolog, Paf1/RNA polymerase II complex component Neighboring gene uncharacterized LOC112268149 Neighboring gene MAPK6 divergent transcript Neighboring gene uncharacterized LOC112268150 Neighboring gene MAPK6-RPS13P8 intergenic CAGE-defined mid-level expression enhancer Neighboring gene ribosomal protein S13 pseudogene 8

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

HIV-1 interactions

Protein interactions

Protein Gene Interaction Pubs
Envelope surface glycoprotein gp120 env HIV-1 gp120 binding to CD4 results in activation of the mitogen-activated protein kinase (MAPK) in CD4(+) lymphocytes prestimulated through their T-cell receptor (TCR) PubMed

Go to the HIV-1, Human Interaction Database

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • DKFZp686F03189

Gene Ontology Provided by GOA

Function Evidence Code Pubs
ATP binding IEA
Inferred from Electronic Annotation
more info
 
MAP kinase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
MAP kinase activity ISS
Inferred from Sequence or Structural Similarity
more info
 
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
protein heterodimerization activity IEA
Inferred from Electronic Annotation
more info
 
protein kinase binding IEA
Inferred from Electronic Annotation
more info
 
protein serine/threonine kinase activity TAS
Traceable Author Statement
more info
 
Process Evidence Code Pubs
MAPK cascade IEA
Inferred from Electronic Annotation
more info
 
cell cycle IEA
Inferred from Electronic Annotation
more info
 
cellular response to organic substance IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
intracellular signal transduction IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
positive regulation of dendritic spine development IEA
Inferred from Electronic Annotation
more info
 
protein phosphorylation ISS
Inferred from Sequence or Structural Similarity
more info
 
regulation of gene expression IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
signal transduction TAS
Traceable Author Statement
more info
PubMed 
Component Evidence Code Pubs
cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
cytoplasm ISS
Inferred from Sequence or Structural Similarity
more info
 
cytosol IDA
Inferred from Direct Assay
more info
 
cytosol TAS
Traceable Author Statement
more info
 
nucleoplasm TAS
Traceable Author Statement
more info
 
nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
nucleus ISS
Inferred from Sequence or Structural Similarity
more info
 
protein-containing complex IEA
Inferred from Electronic Annotation
more info
 
septin cytoskeleton IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
mitogen-activated protein kinase 6
Names
ERK-3
MAP kinase 6
MAP kinase isoform p97
MAPK 6
extracellular signal-regulated kinase 3
extracellular signal-regulated kinase, p97
p97-MAPK
protein kinase, mitogen-activated 5
protein kinase, mitogen-activated 6
NP_002739.1
XP_005254594.1
XP_005254595.1
XP_011520084.1

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_002748.4NP_002739.1  mitogen-activated protein kinase 6

    See identical proteins and their annotated locations for NP_002739.1

    Status: REVIEWED

    Source sequence(s)
    AC023906, BC035492, DA109756, L77964
    Consensus CDS
    CCDS10147.1
    UniProtKB/Swiss-Prot
    Q16659
    Related
    ENSP00000261845.5, ENST00000261845.7
    Conserved Domains (1) summary
    cd07854
    Location:14355
    STKc_MAPK4_6; Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 (also called ERK4) and 6 (also called ERK3)

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000015.10 Reference GRCh38.p13 Primary Assembly

    Range
    52019219..52067375
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005254538.2XP_005254595.1  mitogen-activated protein kinase 6 isoform X1

    See identical proteins and their annotated locations for XP_005254595.1

    UniProtKB/Swiss-Prot
    Q16659
    Conserved Domains (1) summary
    cd07854
    Location:14355
    STKc_MAPK4_6; Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 (also called ERK4) and 6 (also called ERK3)
  2. XM_011521782.1XP_011520084.1  mitogen-activated protein kinase 6 isoform X1

    See identical proteins and their annotated locations for XP_011520084.1

    UniProtKB/Swiss-Prot
    Q16659
    Conserved Domains (1) summary
    cd07854
    Location:14355
    STKc_MAPK4_6; Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 (also called ERK4) and 6 (also called ERK3)
  3. XM_005254537.3XP_005254594.1  mitogen-activated protein kinase 6 isoform X1

    See identical proteins and their annotated locations for XP_005254594.1

    UniProtKB/Swiss-Prot
    Q16659
    Conserved Domains (1) summary
    cd07854
    Location:14355
    STKc_MAPK4_6; Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 (also called ERK4) and 6 (also called ERK3)
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