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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_016644.2 RefSeqGene
- Range
-
4952..148972
- Download
- GenBank, FASTA, Sequence Viewer (Graphics), LRG_363
mRNA and Protein(s)
-
NM_001034850.3 → NP_001030022.1 reticulophagy regulator 1 isoform 1
See identical proteins and their annotated locations for NP_001030022.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1).
- Source sequence(s)
-
AC020980, AC022113
- Consensus CDS
-
CCDS43304.1
- UniProtKB/Swiss-Prot
-
Q9H6L5
- Related
- ENSP00000304642.9, ENST00000306320.9
- Conserved Domains (2) summary
-
- pfam02453
Location:85 → 233
- Reticulon; Reticulon
- cl21460
Location:323 → 415
- HAD_like; Haloacid Dehalogenase-like Hydrolases
-
NM_019000.5 → NP_061873.2 reticulophagy regulator 1 isoform 2
See identical proteins and their annotated locations for NP_061873.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR, lacks a portion of the 5' coding region and initiates translation at an alternate start codon, compared to variant 1. The encoded isoform (2) is shorter and has a distinct N-terminus, compared to isoform 1.
- Source sequence(s)
-
AC022113, AK024920, AL832438
- Consensus CDS
-
CCDS43305.1
- UniProtKB/Swiss-Prot
-
Q9H6L5
- Related
- ENSP00000382691.2, ENST00000399793.6
- Conserved Domains (1) summary
-
- cl21460
Location:182 → 274
- HAD_like; Haloacid Dehalogenase-like Hydrolases
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p13 Primary Assembly
Genomic
-
NC_000005.10 Reference GRCh38.p13 Primary Assembly
- Range
-
16473038..16617096 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_011514053.3 → XP_011512355.1 reticulophagy regulator 1 isoform X1
-
XM_011514055.3 → XP_011512357.1 reticulophagy regulator 1 isoform X3
- Conserved Domains (1) summary
-
- cl21460
Location:190 → 282
- HAD_like; Haloacid Dehalogenase-like Hydrolases
-
XM_024446118.1 → XP_024301886.1 reticulophagy regulator 1 isoform X4
- Conserved Domains (1) summary
-
- cl21460
Location:148 → 240
- HAD_like; Haloacid Dehalogenase-like Hydrolases
-
XM_011514054.2 → XP_011512356.1 reticulophagy regulator 1 isoform X2
-
XM_024446117.1 → XP_024301885.1 reticulophagy regulator 1 isoform X4
- Conserved Domains (1) summary
-
- cl21460
Location:148 → 240
- HAD_like; Haloacid Dehalogenase-like Hydrolases