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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001307936.2 → NP_001294865.1 sodium-coupled neutral amino acid symporter 2 isoform 2 precursor
See identical proteins and their annotated locations for NP_001294865.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) lacks an exon in its 5' coding region compared to variant 1. This variant represents translation initiation at an alternate start codon compared to variant 1; the 5'-most initiation codon, as used in variant 1, is associated with a truncated ORF that would render the transcript a candidate for nonsense-mediated decay (NMD). Leaky scanning may allow translation initiation at the alternate start codon to encode an isoform (2) that has a distinct and shorter N-terminus, compared to isoform 1.
- Source sequence(s)
-
AK001700, BC029379, BC040342, DA725217
- Consensus CDS
-
CCDS76551.1
- UniProtKB/Swiss-Prot
-
Q96QD8
- UniProtKB/TrEMBL
-
Q8NHT5
- Conserved Domains (1) summary
-
- cl00456
Location:5 → 395
- SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain
-
NM_018976.5 → NP_061849.2 sodium-coupled neutral amino acid symporter 2 isoform 1
See identical proteins and their annotated locations for NP_061849.2
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1).
- Source sequence(s)
-
AC025031, BC040342, DA725217
- Consensus CDS
-
CCDS8749.1
- UniProtKB/Swiss-Prot
- Q96QD8, Q9P2G5
- UniProtKB/TrEMBL
-
A0A024R0W3
- Related
- ENSP00000256689.5, ENST00000256689.10
- Conserved Domains (1) summary
-
- cl00456
Location:69 → 495
- SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000012.12 Reference GRCh38.p14 Primary Assembly
- Range
-
46358188..46372773 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047429019.1 → XP_047284975.1 sodium-coupled neutral amino acid transporter 2 isoform X1
- Related
- ENSP00000482873.1, ENST00000612232.1
-
XM_047429020.1 → XP_047284976.1 sodium-coupled neutral amino acid transporter 2 isoform X2
Alternate T2T-CHM13v2.0
Genomic
-
NC_060936.1 Alternate T2T-CHM13v2.0
- Range
-
46317747..46332332 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)