NEW
Try the new Transcript table
These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001006114.3 → NP_001006114.1 endoribonuclease YbeY isoform 2
See identical proteins and their annotated locations for NP_001006114.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR, lacks two 3' exons, and its 3' terminal exon extends past a splice site that is used in variant 1, resulting in a novel 3' coding region and 3' UTR, compared to variant 1. The encoded isoform (2) is shorter and has a distinct C-terminus, compared to isoform 1. Variants 2 and 7 encode the same isoform.
- Source sequence(s)
-
AK294975, AP000471, DC384882
- UniProtKB/TrEMBL
-
Q8TBC8
- Conserved Domains (1) summary
-
- cl00402
Location:35 → 113
- UPF0054; Uncharacterized protein family UPF0054
-
NM_001314022.2 → NP_001300951.1 endoribonuclease YbeY isoform 3
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) lacks an alternate, in-frame exon in the central coding region, compared to variant 1. The encoded isoform (3) is shorter than isoform 1.
- Source sequence(s)
-
AP000471, AY040874, DC384882
- Consensus CDS
-
CCDS82687.1
- UniProtKB/Swiss-Prot
-
P58557
- Related
- ENSP00000340675.6, ENST00000339195.10
- Conserved Domains (1) summary
-
- cl00402
Location:35 → 106
- UPF0054; Uncharacterized protein family UPF0054
-
NM_001314023.2 → NP_001300952.1 endoribonuclease YbeY isoform 4
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) differs in the 5' UTR and uses an alternate in-frame splice site in the 5' coding region, compared to variant 1. The encoded isoform (4) is shorter than isoform 1.
- Source sequence(s)
-
AP000471, AY040875, DC384882
- Consensus CDS
-
CCDS82685.1
- UniProtKB/Swiss-Prot
-
P58557
- Related
- ENSP00000380808.1, ENST00000397694.5
- Conserved Domains (2) summary
-
- pfam09377
Location:4 → 32
- SBDS_C; SBDS protein C-terminal domain
- cl00402
Location:29 → 104
- UPF0054; Uncharacterized protein family UPF0054
-
NM_001314024.2 → NP_001300953.1 endoribonuclease YbeY isoform 5
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) differs in the 5' UTR, uses an alternate in-frame splice site, and lacks an alternate in-frame exon in the coding region, compared to variant 1. The encoded isoform (5) is shorter than isoform 1.
- Source sequence(s)
-
AP000471, AY040876, DC384882
- Consensus CDS
-
CCDS82686.1
- UniProtKB/Swiss-Prot
-
P58557
- Related
- ENSP00000380806.1, ENST00000397692.5
- Conserved Domains (1) summary
-
- cl00402
Location:27 → 61
- UPF0054; Uncharacterized protein family UPF0054
-
NM_001314025.2 → NP_001300954.1 endoribonuclease YbeY isoform 1
Status: REVIEWED
- Description
- Transcript Variant: This variant (6) differs in the 5' UTR compared to variant 1. Variants 1 and 6 encode the same isoform (1).
- Source sequence(s)
-
AK128875, AP000471, AY040874, DC384882
- Consensus CDS
-
CCDS33591.1
- UniProtKB/Swiss-Prot
- D3DSN2, P58557
- Related
- ENSP00000380813.4, ENST00000397701.9
- Conserved Domains (1) summary
-
- TIGR00043
Location:35 → 149
- TIGR00043; rRNA maturation RNase YbeY
-
NM_001314026.2 → NP_001300955.1 endoribonuclease YbeY isoform 2
Status: REVIEWED
- Description
- Transcript Variant: This variant (7) lacks two 3' exons, and its 3' terminal exon extends past a splice site that is used in variant 1. This results in a novel 3' coding region and 3' UTR, compared to variant 1. The encoded isoform (2) is shorter and has a distinct C-terminus, compared to isoform 1. Variants 2 and 7 encode the same isoform.
- Source sequence(s)
-
AK294975, AY040873, BC068100, DC384882
- UniProtKB/Swiss-Prot
-
P58557
- UniProtKB/TrEMBL
-
Q8TBC8
- Conserved Domains (1) summary
-
- cl00402
Location:35 → 113
- UPF0054; Uncharacterized protein family UPF0054
-
NM_058181.3 → NP_478061.1 endoribonuclease YbeY isoform 1
See identical proteins and their annotated locations for NP_478061.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes the longest isoform (1).
- Source sequence(s)
-
AP000471, AY040873, BG473705, DC384882
- Consensus CDS
-
CCDS33591.1
- UniProtKB/Swiss-Prot
- D3DSN2, P58557
- Related
- ENSP00000329614.3, ENST00000329319.7
- Conserved Domains (1) summary
-
- TIGR00043
Location:35 → 149
- TIGR00043; rRNA maturation RNase YbeY