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DCAF11 DDB1 and CUL4 associated factor 11 [ Bos taurus (domestic cattle) ]

Gene ID: 539433, updated on 17-Aug-2024

Summary

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Official Symbol
DCAF11provided by VGNC
Official Full Name
DDB1 and CUL4 associated factor 11provided by VGNC
Primary source
VGNC:VGNC:97258
See related
BGD:BT22020; Ensembl:ENSBTAG00000021392
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as
WDR23
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 10
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 10 NC_037337.1 (21018371..21029337, complement)

Chromosome 10 - NC_037337.1Genomic Context describing neighboring genes Neighboring gene proteasome activator subunit 2 Neighboring gene ER membrane protein complex subunit 9 Neighboring gene proteasome activator subunit 1 Neighboring gene fat storage inducing transmembrane protein 1 Neighboring gene uncharacterized LOC132346345 Neighboring gene phosphoenolpyruvate carboxykinase 2, mitochondrial Neighboring gene neural retina leucine zipper

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037337.1 Chromosome 10 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence evaluation of four pooled-tissue normalized bovine cDNA libraries and construction of a gene index for cattle. Smith TP, et al. Genome Res, 2001 Apr. PMID 11282978, Free PMC Article
  2. Characterization of 954 bovine full-CDS cDNA sequences. Harhay GP, et al. BMC Genomics, 2005 Nov 23. PMID 16305752, Free PMC Article
  3. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Clone Names

  • MGC137750

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Cul4-RING E3 ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DDB1- and CUL4-associated factor 11
Names
WD repeat domain 23
WD repeat-containing protein 23

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001014954.1 → NP_001014954.1  DDB1- and CUL4-associated factor 11

    See identical proteins and their annotated locations for NP_001014954.1

    Status: PROVISIONAL

    Source sequence(s)
    BT020932
    UniProtKB/Swiss-Prot
    Q5E9I8
    UniProtKB/TrEMBL
    Q2KI64
    Related
    ENSBTAP00000028515.2, ENSBTAT00000028515.4
    Conserved Domains (3) summary
    COG2319
    Location:176 → 510
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:221 → 263
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:180 → 511
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037337.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    21018371..21029337 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059890576.1 → XP_059746559.1  DDB1- and CUL4-associated factor 11 isoform X1

    UniProtKB/TrEMBL
    F1MVT2, Q2KI64

  2. XM_059890577.1 → XP_059746560.1  DDB1- and CUL4-associated factor 11 isoform X1

    UniProtKB/TrEMBL
    F1MVT2, Q2KI64

  3. XM_005211367.5 → XP_005211424.1  DDB1- and CUL4-associated factor 11 isoform X1

    See identical proteins and their annotated locations for XP_005211424.1

    UniProtKB/TrEMBL
    F1MVT2, Q2KI64
    Conserved Domains (2) summary
    sd00039
    Location:221 → 263
    7WD40; WD40 repeat [structural motif]
    cl25539
    Location:180 → 511
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  4. XM_005211375.5 → XP_005211432.1  DDB1- and CUL4-associated factor 11 isoform X2

    See identical proteins and their annotated locations for XP_005211432.1

    UniProtKB/TrEMBL
    Q2KI64
    Conserved Domains (2) summary
    sd00039
    Location:177 → 219
    7WD40; WD40 repeat [structural motif]
    cl25539
    Location:127 → 467
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  5. XM_005211370.5 → XP_005211427.1  DDB1- and CUL4-associated factor 11 isoform X1

    See identical proteins and their annotated locations for XP_005211427.1

    UniProtKB/TrEMBL
    F1MVT2, Q2KI64
    Conserved Domains (2) summary
    sd00039
    Location:221 → 263
    7WD40; WD40 repeat [structural motif]
    cl25539
    Location:180 → 511
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  6. XM_005211374.5 → XP_005211431.1  DDB1- and CUL4-associated factor 11 isoform X2

    See identical proteins and their annotated locations for XP_005211431.1

    UniProtKB/TrEMBL
    Q2KI64
    Conserved Domains (2) summary
    sd00039
    Location:177 → 219
    7WD40; WD40 repeat [structural motif]
    cl25539
    Location:127 → 467
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  7. XM_005211371.5 → XP_005211428.1  DDB1- and CUL4-associated factor 11 isoform X1

    See identical proteins and their annotated locations for XP_005211428.1

    UniProtKB/TrEMBL
    F1MVT2, Q2KI64
    Conserved Domains (2) summary
    sd00039
    Location:221 → 263
    7WD40; WD40 repeat [structural motif]
    cl25539
    Location:180 → 511
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  8. XM_005211372.5 → XP_005211429.1  DDB1- and CUL4-associated factor 11 isoform X2

    See identical proteins and their annotated locations for XP_005211429.1

    UniProtKB/TrEMBL
    Q2KI64
    Conserved Domains (2) summary
    sd00039
    Location:177 → 219
    7WD40; WD40 repeat [structural motif]
    cl25539
    Location:127 → 467
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  9. XM_059890575.1 → XP_059746558.1  DDB1- and CUL4-associated factor 11 isoform X1

    UniProtKB/TrEMBL
    F1MVT2, Q2KI64

  10. XM_005211369.5 → XP_005211426.1  DDB1- and CUL4-associated factor 11 isoform X1

    See identical proteins and their annotated locations for XP_005211426.1

    UniProtKB/TrEMBL
    F1MVT2, Q2KI64
    Conserved Domains (2) summary
    sd00039
    Location:221 → 263
    7WD40; WD40 repeat [structural motif]
    cl25539
    Location:180 → 511
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  11. XM_024997735.2 → XP_024853503.1  DDB1- and CUL4-associated factor 11 isoform X1

    UniProtKB/TrEMBL
    F1MVT2, Q2KI64
    Conserved Domains (2) summary
    sd00039
    Location:221 → 263
    7WD40; WD40 repeat [structural motif]
    cl25539
    Location:180 → 511
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  12. XM_024997734.2 → XP_024853502.1  DDB1- and CUL4-associated factor 11 isoform X1

    UniProtKB/TrEMBL
    F1MVT2, Q2KI64
    Conserved Domains (2) summary
    sd00039
    Location:221 → 263
    7WD40; WD40 repeat [structural motif]
    cl25539
    Location:180 → 511
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  13. XM_059890579.1 → XP_059746562.1  DDB1- and CUL4-associated factor 11 isoform X2

    UniProtKB/TrEMBL
    Q2KI64

  14. XM_005211368.5 → XP_005211425.1  DDB1- and CUL4-associated factor 11 isoform X1

    See identical proteins and their annotated locations for XP_005211425.1

    UniProtKB/TrEMBL
    F1MVT2, Q2KI64
    Conserved Domains (2) summary
    sd00039
    Location:221 → 263
    7WD40; WD40 repeat [structural motif]
    cl25539
    Location:180 → 511
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  15. XM_059890578.1 → XP_059746561.1  DDB1- and CUL4-associated factor 11 isoform X1

    UniProtKB/TrEMBL
    F1MVT2, Q2KI64
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q5E9I8.1 GenPept UniProtKB/Swiss-Prot:Q5E9I8

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