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WDR89 WD repeat domain 89 [ Bos taurus (domestic cattle) ]

Gene ID: 539045, updated on 18-Aug-2024

Summary

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Official Symbol
WDR89provided by VGNC
Official Full Name
WD repeat domain 89provided by VGNC
Primary source
VGNC:VGNC:36925
See related
BGD:BT27250; Ensembl:ENSBTAG00000008815
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 10
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 10 NC_037337.1 (75838131..75886231, complement)

Chromosome 10 - NC_037337.1Genomic Context describing neighboring genes Neighboring gene protein CBFA2T2-like Neighboring gene protein phosphatase 2 regulatory subunit B'epsilon Neighboring gene uncharacterized LOC101904356 Neighboring gene uncharacterized LOC104973205 Neighboring gene sphingosine-1-phosphate phosphatase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037337.1 Chromosome 10 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Clone Names

  • MGC128803

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
WD repeat-containing protein 89

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001034658.2 → NP_001029830.1  WD repeat-containing protein 89

    See identical proteins and their annotated locations for NP_001029830.1

    Status: PROVISIONAL

    Source sequence(s)
    BC103250
    UniProtKB/Swiss-Prot
    Q3ZBK1
    UniProtKB/TrEMBL
    A0AAA9TDC2
    Related
    ENSBTAP00000085705.1, ENSBTAT00000089709.1
    Conserved Domains (3) summary
    COG2319
    Location:17 → 348
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:73 → 111
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:40 → 348
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037337.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    75838131..75886231 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005212023.5 → XP_005212080.1  WD repeat-containing protein 89 isoform X2

    See identical proteins and their annotated locations for XP_005212080.1

    UniProtKB/Swiss-Prot
    Q3ZBK1
    UniProtKB/TrEMBL
    A0AAA9TDC2
    Related
    ENSBTAP00000098543.1, ENSBTAT00000112964.1
    Conserved Domains (3) summary
    COG2319
    Location:17 → 348
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:73 → 111
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:40 → 348
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  2. XM_005212022.5 → XP_005212079.1  WD repeat-containing protein 89 isoform X2

    See identical proteins and their annotated locations for XP_005212079.1

    UniProtKB/Swiss-Prot
    Q3ZBK1
    UniProtKB/TrEMBL
    A0AAA9TDC2
    Conserved Domains (3) summary
    COG2319
    Location:17 → 348
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:73 → 111
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:40 → 348
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  3. XM_024997725.2 → XP_024853493.1  WD repeat-containing protein 89 isoform X1

    UniProtKB/TrEMBL
    A0AAA9SH14, A0AAA9TDC2
    Conserved Domains (2) summary
    sd00039
    Location:91 → 129
    7WD40; WD40 repeat [structural motif]
    cl25539
    Location:58 → 366
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  4. XM_024997724.2 → XP_024853492.1  WD repeat-containing protein 89 isoform X1

    UniProtKB/TrEMBL
    A0AAA9SH14, A0AAA9TDC2
    Related
    ENSBTAP00000082986.1, ENSBTAT00000105053.1
    Conserved Domains (2) summary
    sd00039
    Location:91 → 129
    7WD40; WD40 repeat [structural motif]
    cl25539
    Location:58 → 366
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q3ZBK1.1 GenPept UniProtKB/Swiss-Prot:Q3ZBK1

Gene LinkOut

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