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TMED7 transmembrane p24 trafficking protein 7 [ Homo sapiens (human) ]

Gene ID: 51014, updated on 4-Oct-2020

Summary

Official Symbol
TMED7provided by HGNC
Official Full Name
transmembrane p24 trafficking protein 7provided by HGNC
Primary source
HGNC:HGNC:24253
See related
Ensembl:ENSG00000134970
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
p27; p24g3; CGI-109; p24gamma3
Expression
Ubiquitous expression in thyroid (RPKM 58.5), endometrium (RPKM 47.2) and 25 other tissues See more
Orthologs

Genomic context

See TMED7 in Genome Data Viewer
Location:
5q22.3
Exon count:
3
Annotation release Status Assembly Chr Location
109.20200815 current GRCh38.p13 (GCF_000001405.39) 5 NC_000005.10 (115613210..115626036, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (114948905..114961876, complement)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene fem-1 homolog C Neighboring gene TMED7-TICAM2 readthrough Neighboring gene toll like receptor adaptor molecule 2 Neighboring gene uncharacterized LOC101927100 Neighboring gene uncharacterized LOC102467217 Neighboring gene H3 histone pseudogene 24

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Readthrough TMED7-TICAM2

Readthrough gene: TMED7-TICAM2, Included gene: TICAM2

Homology

Clone Names

  • FLJ57776, FLJ90481

Gene Ontology Provided by GOA

Process Evidence Code Pubs
ER to Golgi vesicle-mediated transport IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
ER to Golgi vesicle-mediated transport TAS
Traceable Author Statement
more info
 
Golgi organization IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
intracellular protein transport IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
retrograde vesicle-mediated transport, Golgi to ER TAS
Traceable Author Statement
more info
 
Component Evidence Code Pubs
COPI vesicle coat TAS
Traceable Author Statement
more info
PubMed 
COPII vesicle coat TAS
Traceable Author Statement
more info
PubMed 
COPII-coated ER to Golgi transport vesicle IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Golgi apparatus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Golgi apparatus IDA
Inferred from Direct Assay
more info
PubMed 
Golgi membrane TAS
Traceable Author Statement
more info
 
endoplasmic reticulum IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
endoplasmic reticulum IDA
Inferred from Direct Assay
more info
PubMed 
endoplasmic reticulum membrane TAS
Traceable Author Statement
more info
 
endoplasmic reticulum-Golgi intermediate compartment IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
endoplasmic reticulum-Golgi intermediate compartment IDA
Inferred from Direct Assay
more info
PubMed 
endoplasmic reticulum-Golgi intermediate compartment membrane TAS
Traceable Author Statement
more info
 
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
transport vesicle TAS
Traceable Author Statement
more info
 

General protein information

Preferred Names
transmembrane emp24 domain-containing protein 7
Names
p24 family protein gamma-3
transmembrane emp24 protein transport domain containing 7

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_181836.6NP_861974.1  transmembrane emp24 domain-containing protein 7 precursor

    See identical proteins and their annotated locations for NP_861974.1

    Status: VALIDATED

    Source sequence(s)
    AC010226, BC019349, DC321837
    Consensus CDS
    CCDS4120.1
    UniProtKB/Swiss-Prot
    Q9Y3B3
    Related
    ENSP00000405926.3, ENST00000456936.4
    Conserved Domains (1) summary
    pfam01105
    Location:36213
    EMP24_GP25L; emp24/gp25L/p24 family/GOLD

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20200815

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p13 Primary Assembly

    Range
    115613210..115626036 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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