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GPR50 G protein-coupled receptor 50 [ Canis lupus familiaris (dog) ]

Gene ID: 492213, updated on 17-Aug-2024

Summary

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Official Symbol
GPR50provided by VGNC
Official Full Name
G protein-coupled receptor 50provided by VGNC
Primary source
VGNC:VGNC:41437
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: X
Exon count:
2
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) X NC_051843.1 (121486314..121491188)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) X NC_006621.4 (104647468..104652539)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) X NC_049260.1 (120572470..120577339)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) X NC_049299.1 (118212023..118216889)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) X NC_049780.1 (120689866..120694730)

Chromosome X - NC_051843.1Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein S4, X isoform-like Neighboring gene S100 calcium binding protein A10 pseudogene Neighboring gene 60S ribosomal protein L29-like Neighboring gene vacuolar ATPase assembly factor VMA21

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables melatonin receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
melatonin-related receptor

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051843.1 Reference ROS_Cfam_1.0

    Range
    121486314..121491188
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038451123.1 → XP_038307051.1  melatonin-related receptor

    UniProtKB/TrEMBL
    A0A8C0LKB6, A0A8C0SUJ3, A0A8I3S8U8, A0A8P0NK60
    Conserved Domains (2) summary
    PHA03247
    Location:350 → 592
    PHA03247; large tegument protein UL36; Provisional
    cd15209
    Location:29 → 305
    7tmA_Mel1; melatonin receptor 1, member of the class A family of seven-transmembrane G protein-coupled receptors

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049299.1 Alternate UMICH_Zoey_3.1

    Range
    118212023..118216889
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038525076.1 → XP_038381004.1  melatonin-related receptor

    Conserved Domains (2) summary
    PHA03247
    Location:350 → 592
    PHA03247; large tegument protein UL36; Provisional
    cd15209
    Location:29 → 305
    7tmA_Mel1; melatonin receptor 1, member of the class A family of seven-transmembrane G protein-coupled receptors

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049780.1 Alternate UNSW_CanFamBas_1.0

    Range
    120689866..120694730
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038651082.1 → XP_038507010.1  melatonin-related receptor

    Conserved Domains (2) summary
    PHA03247
    Location:350 → 592
    PHA03247; large tegument protein UL36; Provisional
    cd15209
    Location:29 → 305
    7tmA_Mel1; melatonin receptor 1, member of the class A family of seven-transmembrane G protein-coupled receptors

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049260.1 Alternate UU_Cfam_GSD_1.0

    Range
    120572470..120577339
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038586649.1 → XP_038442577.1  melatonin-related receptor

    UniProtKB/TrEMBL
    A0A8C0LKB6, A0A8C0SUJ3, A0A8I3S8U8, A0A8P0NK60
    Conserved Domains (2) summary
    PHA03247
    Location:350 → 592
    PHA03247; large tegument protein UL36; Provisional
    cd15209
    Location:29 → 305
    7tmA_Mel1; melatonin receptor 1, member of the class A family of seven-transmembrane G protein-coupled receptors

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006621.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    104647468..104652539
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_549333.5 → XP_549333.3  melatonin-related receptor

    UniProtKB/TrEMBL
    A0A8C0LKB6, A0A8C0SUJ3, A0A8I3S8U8, A0A8P0NK60
    Conserved Domains (2) summary
    PHA03247
    Location:350 → 592
    PHA03247; large tegument protein UL36; Provisional
    cd15209
    Location:29 → 305
    7tmA_Mel1; melatonin receptor 1, member of the class A family of seven-transmembrane G protein-coupled receptors
Nucleotide Protein
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