U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

A1CF APOBEC1 complementation factor [ Canis lupus familiaris (dog) ]

Gene ID: 477581, updated on 17-Aug-2024

Summary

Go to the top of the page Help
Official Symbol
A1CFprovided by VGNC
Official Full Name
APOBEC1 complementation factorprovided by VGNC
Primary source
VGNC:VGNC:37399
See related
Ensembl:ENSCAFG00845028778
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 26
Exon count:
12
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 26 NC_051830.1 (38560154..38642825)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 26 NC_006608.4 (36912827..36995367)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 26 NC_049247.1 (37288420..37371161)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 26 NC_049286.1 (36461590..36550642)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 26 NC_049767.1 (36048241..36131022)

Chromosome 26 - NC_051830.1Genomic Context describing neighboring genes Neighboring gene protein kinase cGMP-dependent 1 Neighboring gene uncharacterized LOC111092582 Neighboring gene uncharacterized LOC102154871 Neighboring gene uncharacterized LOC119866252 Neighboring gene U6 spliceosomal RNA Neighboring gene N-acylsphingosine amidohydrolase 2

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
APOBEC1 complementation factor

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051830.1 Reference ROS_Cfam_1.0

    Range
    38560154..38642825
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038437670.1 → XP_038293598.1  APOBEC1 complementation factor isoform X1

    UniProtKB/TrEMBL
    A0A8C0LRJ1, A0A8C0R8F3, A0A8C0TIC8, A0A8I3PZK3
    Related
    ENSCAFP00845039883.1, ENSCAFT00845050874.1
    Conserved Domains (1) summary
    TIGR01648
    Location:2 → 590
    hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family

  2. XM_038437671.1 → XP_038293599.1  APOBEC1 complementation factor isoform X2

    UniProtKB/TrEMBL
    A0A8C0R8F3
    Conserved Domains (1) summary
    TIGR01648
    Location:2 → 582
    hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049286.1 Alternate UMICH_Zoey_3.1

    Range
    36461590..36550642
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038512542.1 → XP_038368470.1  APOBEC1 complementation factor isoform X1

    Conserved Domains (1) summary
    TIGR01648
    Location:2 → 590
    hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family

  2. XM_038512543.1 → XP_038368471.1  APOBEC1 complementation factor isoform X2

    Conserved Domains (1) summary
    TIGR01648
    Location:2 → 582
    hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049767.1 Alternate UNSW_CanFamBas_1.0

    Range
    36048241..36131022
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038640243.1 → XP_038496171.1  APOBEC1 complementation factor isoform X1

    Conserved Domains (1) summary
    TIGR01648
    Location:2 → 590
    hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family

  2. XM_038640244.1 → XP_038496172.1  APOBEC1 complementation factor isoform X2

    Conserved Domains (1) summary
    TIGR01648
    Location:2 → 582
    hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049247.1 Alternate UU_Cfam_GSD_1.0

    Range
    37288420..37371161
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038576032.1 → XP_038431960.1  APOBEC1 complementation factor isoform X1

    UniProtKB/TrEMBL
    A0A8C0LRJ1, A0A8C0R8F3, A0A8C0TIC8, A0A8I3PZK3
    Conserved Domains (1) summary
    TIGR01648
    Location:2 → 590
    hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family

  2. XM_038576033.1 → XP_038431961.1  APOBEC1 complementation factor isoform X2

    UniProtKB/TrEMBL
    A0A8C0R8F3
    Conserved Domains (1) summary
    TIGR01648
    Location:2 → 582
    hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006608.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    36912827..36995367
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_534776.7 → XP_534776.2  APOBEC1 complementation factor isoform X1

    UniProtKB/TrEMBL
    A0A8C0LRJ1, A0A8C0R8F3, A0A8C0TIC8, A0A8I3PZK3
    Conserved Domains (1) summary
    TIGR01648
    Location:2 → 590
    hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family

  2. XM_855933.6 → XP_861026.1  APOBEC1 complementation factor isoform X2

    UniProtKB/TrEMBL
    A0A8C0R8F3
    Conserved Domains (1) summary
    TIGR01648
    Location:2 → 582
    hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Miscellaneous