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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_029916.1 RefSeqGene
- Range
-
5049..91267
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001198818.2 → NP_001185747.1 APOBEC1 complementation factor isoform 1
See identical proteins and their annotated locations for NP_001185747.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) differs in the 5' UTR and coding sequence and lacks an alternate in-frame segment compared to variant 5. The resulting isoform (1) has a shorter and distinct N-terminus and lacks a short internal segment compared to isoform 4. Variants 1, 4, and 7 encode the same isoform (1).
- Source sequence(s)
-
AK000324, AK291982, AL589794
- Consensus CDS
-
CCDS7241.1
- UniProtKB/Swiss-Prot
-
Q9NQ94
- UniProtKB/TrEMBL
-
A0A024QZJ5
- Related
- ENSP00000397953.2, ENST00000414883.2
- Conserved Domains (1) summary
-
- TIGR01648
Location:2 → 586
- hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family
-
NM_001198819.2 → NP_001185748.1 APOBEC1 complementation factor isoform 4
See identical proteins and their annotated locations for NP_001185748.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) represents the longest transcript and encodes the longest isoform (4).
- Source sequence(s)
-
AK291982, AK303801, AL512366, AL589794
- Consensus CDS
-
CCDS73133.1
- UniProtKB/Swiss-Prot
-
Q9NQ94
- UniProtKB/TrEMBL
- B4E1E3, F8W9F8
- Related
- ENSP00000378868.3, ENST00000395489.7
- Conserved Domains (5) summary
-
- cd12486
Location:63 → 140
- RRM1_ACF; RNA recognition motif 1 found in vertebrate APOBEC-1 complementation factor (ACF)
- cd12490
Location:142 → 226
- RRM2_ACF; RNA recognition motif 2 in vertebrate APOBEC-1 complementation factor (ACF)
- cd12498
Location:231 → 313
- RRM3_ACF; RNA recognition motif 3 in vertebrate APOBEC-1 complementation factor (ACF)
- TIGR01648
Location:29 → 602
- hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family
- pfam14709
Location:455 → 531
- DND1_DSRM; double strand RNA binding domain from DEAD END PROTEIN 1
-
NM_001198820.2 → NP_001185749.1 APOBEC1 complementation factor isoform 3
See identical proteins and their annotated locations for NP_001185749.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (6) differs in the 5' UTR and lacks an alternate in-frame segment compared to variant 5. The resulting isoform (3) lacks a short internal segment compared to isoform 4. Variants 3 and 6 both encode the same isoform (3).
- Source sequence(s)
-
AK303801, AL589794, BC144196
- Consensus CDS
-
CCDS7243.1
- UniProtKB/Swiss-Prot
-
Q9NQ94
- UniProtKB/TrEMBL
- A0A024QZI9, B4E1E3
- Related
- ENSP00000378873.2, ENST00000395495.6
- Conserved Domains (5) summary
-
- cd12486
Location:63 → 140
- RRM1_ACF; RNA recognition motif 1 found in vertebrate APOBEC-1 complementation factor (ACF)
- cd12490
Location:142 → 226
- RRM2_ACF; RNA recognition motif 2 in vertebrate APOBEC-1 complementation factor (ACF)
- cd12498
Location:231 → 313
- RRM3_ACF; RNA recognition motif 3 in vertebrate APOBEC-1 complementation factor (ACF)
- TIGR01648
Location:29 → 594
- hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family
- pfam14709
Location:447 → 523
- DND1_DSRM; double strand RNA binding domain from DEAD END PROTEIN 1
-
NM_001370130.1 → NP_001357059.1 APOBEC1 complementation factor isoform 1
Status: REVIEWED
- Description
- Transcript Variant: This variant (7) differs in the 5' UTR and coding sequence compared to variant 5. The resulting isoform (1) has a shorter and distinct N-terminus and lacks a short internal segment compared to isoform 4. Variants 1, 4, and 7 encode the same isoform (1).
- Source sequence(s)
-
AL512366, AL589794
- Consensus CDS
-
CCDS7241.1
- UniProtKB/TrEMBL
-
A0A024QZJ5
- Related
- ENSP00000363113.1, ENST00000374001.6
- Conserved Domains (1) summary
-
- TIGR01648
Location:2 → 586
- hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family
-
NM_001370131.1 → NP_001357060.1 APOBEC1 complementation factor isoform 2
Status: REVIEWED
- Description
- Transcript Variant: This variant (8) differs in the 5' UTR and coding sequence compared to variant 5. The resulting isoform (2) has a shorter and distinct N-terminus compared to isoform 4. Variants 2 and 8 encode the same isoform (2).
- Source sequence(s)
-
AL512366, AL589794
- Consensus CDS
-
CCDS7242.1
- UniProtKB/Swiss-Prot
-
Q9NZD3
- UniProtKB/TrEMBL
-
A0A024QZM7
- Related
- ENSP00000363105.1, ENST00000373993.6
- Conserved Domains (1) summary
-
- TIGR01648
Location:2 → 594
- hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family
-
NM_014576.4 → NP_055391.2 APOBEC1 complementation factor isoform 1
See identical proteins and their annotated locations for NP_055391.2
Status: REVIEWED
- Description
- Transcript Variant: This dominant variant (1), also referred to as the wild type, differs in the 5' UTR and coding sequence and lacks an alternate in-frame segment compared to variant 5. The resulting isoform (1) has a shorter and distinct N-terminus and lacks a short internal segment compared to isoform 4. Variants 1, 4, and 7 encode the same isoform (1).
- Source sequence(s)
-
AF209192, AK000324, AL512366, AL589794
- Consensus CDS
-
CCDS7241.1
- UniProtKB/Swiss-Prot
-
Q9NQ94
- UniProtKB/TrEMBL
-
A0A024QZJ5
- Related
- ENSP00000363109.3, ENST00000373997.8
- Conserved Domains (1) summary
-
- TIGR01648
Location:2 → 586
- hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family
-
NM_138932.3 → NP_620310.1 APOBEC1 complementation factor isoform 2
See identical proteins and their annotated locations for NP_620310.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR and coding sequence compared to variant 5. The resulting isoform (2) has a shorter and distinct N-terminus compared to isoform 4. Variants 2 and 8 encode the same isoform (2).
- Source sequence(s)
-
AK291982, AL589794, BC130519
- Consensus CDS
-
CCDS7242.1
- UniProtKB/Swiss-Prot
- Q9NQ94, Q9NZD3
- UniProtKB/TrEMBL
-
A0A024QZM7
- Conserved Domains (1) summary
-
- TIGR01648
Location:2 → 594
- hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family
-
NM_138933.3 → NP_620311.1 APOBEC1 complementation factor isoform 3
See identical proteins and their annotated locations for NP_620311.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR and lacks an alternate in-frame segment compared to variant 5. The resulting isoform (3) lacks a short internal segment compared to isoform 4. Variants 3 and 6 both encode the same isoform (3).
- Source sequence(s)
-
AK000324, AL589794, BC144196
- Consensus CDS
-
CCDS7243.1
- UniProtKB/Swiss-Prot
-
Q9NQ94
- UniProtKB/TrEMBL
-
A0A024QZI9
- Related
- ENSP00000363107.3, ENST00000373995.7
- Conserved Domains (5) summary
-
- cd12486
Location:63 → 140
- RRM1_ACF; RNA recognition motif 1 found in vertebrate APOBEC-1 complementation factor (ACF)
- cd12490
Location:142 → 226
- RRM2_ACF; RNA recognition motif 2 in vertebrate APOBEC-1 complementation factor (ACF)
- cd12498
Location:231 → 313
- RRM3_ACF; RNA recognition motif 3 in vertebrate APOBEC-1 complementation factor (ACF)
- TIGR01648
Location:29 → 594
- hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family
- pfam14709
Location:447 → 523
- DND1_DSRM; double strand RNA binding domain from DEAD END PROTEIN 1