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FARSA phenylalanyl-tRNA synthetase subunit alpha [ Canis lupus familiaris (dog) ]

Gene ID: 476695, updated on 17-Aug-2024

Summary

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Official Symbol
FARSAprovided by VGNC
Official Full Name
phenylalanyl-tRNA synthetase subunit alphaprovided by VGNC
Primary source
VGNC:VGNC:40733
See related
Ensembl:ENSCAFG00845015291
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 20
Exon count:
13
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 20 NC_051824.1 (49775682..49784201)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 20 NC_006602.4 (49131070..49139532)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 20 NC_049241.1 (49655888..49664348)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 20 NC_049280.1 (48986876..48995337)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 20 NC_049761.1 (49413365..49421812)

Chromosome 20 - NC_051824.1Genomic Context describing neighboring genes Neighboring gene RAD23 homolog A, nucleotide excision repair protein Neighboring gene calreticulin Neighboring gene synaptonemal complex central element protein 2 Neighboring gene glutaryl-CoA dehydrogenase Neighboring gene KLF transcription factor 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phenylalanine-tRNA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phenylalanyl-tRNA aminoacylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of phenylalanine-tRNA ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phenylalanine--tRNA ligase alpha subunit
Names
phenylalanyl-tRNA synthetase alpha subunit
XP_038284379.1
XP_038360023.1
XP_038423052.1
XP_038487195.1
XP_533900.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051824.1 Reference ROS_Cfam_1.0

    Range
    49775682..49784201
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038428451.1 → XP_038284379.1  phenylalanine--tRNA ligase alpha subunit

    UniProtKB/TrEMBL
    A0A8C0P139, A0A8C0QVU1, A0A8C0TLJ6, A0A8I3NTN9, A0A8I3NX27
    Related
    ENSCAFP00845021512.1, ENSCAFT00845027330.1
    Conserved Domains (1) summary
    PLN02853
    Location:8 → 496
    PLN02853; Probable phenylalanyl-tRNA synthetase alpha chain

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049280.1 Alternate UMICH_Zoey_3.1

    Range
    48986876..48995337
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038504095.1 → XP_038360023.1  phenylalanine--tRNA ligase alpha subunit

    Conserved Domains (1) summary
    PLN02853
    Location:8 → 496
    PLN02853; Probable phenylalanyl-tRNA synthetase alpha chain

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049761.1 Alternate UNSW_CanFamBas_1.0

    Range
    49413365..49421812
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038631267.1 → XP_038487195.1  phenylalanine--tRNA ligase alpha subunit

    Conserved Domains (1) summary
    PLN02853
    Location:8 → 496
    PLN02853; Probable phenylalanyl-tRNA synthetase alpha chain

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049241.1 Alternate UU_Cfam_GSD_1.0

    Range
    49655888..49664348
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038567124.1 → XP_038423052.1  phenylalanine--tRNA ligase alpha subunit

    UniProtKB/TrEMBL
    A0A8C0P139, A0A8C0QVU1, A0A8C0TLJ6, A0A8I3NTN9, A0A8I3NX27
    Conserved Domains (1) summary
    PLN02853
    Location:8 → 496
    PLN02853; Probable phenylalanyl-tRNA synthetase alpha chain

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006602.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    49131070..49139532
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_533900.7 → XP_533900.1  phenylalanine--tRNA ligase alpha subunit

    UniProtKB/TrEMBL
    A0A8C0P139, A0A8C0QVU1, A0A8C0TLJ6, A0A8I3NTN9, A0A8I3NX27
    Conserved Domains (1) summary
    PLN02853
    Location:8 → 496
    PLN02853; Probable phenylalanyl-tRNA synthetase alpha chain
Nucleotide Protein
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