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PJA2 praja ring finger ubiquitin ligase 2 [ Pan troglodytes (chimpanzee) ]

Gene ID: 471597, updated on 17-Aug-2024

Summary

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Official Symbol
PJA2provided by VGNC
Official Full Name
praja ring finger ubiquitin ligase 2provided by VGNC
Primary source
VGNC:VGNC:7101
Locus tag
CK820_G0031804
See related
Ensembl:ENSPTRG00000022820
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 4 NC_072402.2 (107054480..107125796, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 5 NC_072403.1 (107123944..107195398, complement)

Chromosome 4 - NC_072402.2Genomic Context describing neighboring genes Neighboring gene FER tyrosine kinase Neighboring gene gap junction alpha-1 protein-like Neighboring gene uncharacterized LOC107974799 Neighboring gene uncharacterized LOC134809966 Neighboring gene uncharacterized LOC107974717 Neighboring gene keratin, type I cytoskeletal 18-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of protein kinase A signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase Praja-2
Names
praja 2, RING-H2 motif containing
praja ring finger 2, E3 ubiquitin protein ligase
XP_526975.2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072402.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    107054480..107125796 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_526975.7 → XP_526975.2  E3 ubiquitin-protein ligase Praja-2

    UniProtKB/TrEMBL
    A0A2I3S2C8, A0A2J8L7Q4, A0A6D2W8Z1, K7CRJ0
    Related
    ENSPTRP00000070991.1
    Conserved Domains (2) summary
    cd16465
    Location:633 → 678
    RING-H2_PJA1_2; RING finger, H2 subclass, found in protein E3 ubiquitin-protein ligase Praja-1, Praja-2, and similar proteins
    cl26761
    Location:352 → 629
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases
Research Materials