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SLC16A4 solute carrier family 16 member 4 [ Pan troglodytes (chimpanzee) ]

Gene ID: 469796, updated on 17-Aug-2024

Summary

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Official Symbol
SLC16A4provided by VGNC
Official Full Name
solute carrier family 16 member 4provided by VGNC
Primary source
VGNC:VGNC:6128
Locus tag
CK820_G0043710
See related
Ensembl:ENSPTRG00000023772
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 1 NC_072398.2 (120802186..120830932)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 1 NC_072398.1 (110468352..110497093, complement)

Chromosome 1 - NC_072398.2Genomic Context describing neighboring genes Neighboring gene prokineticin 1 Neighboring gene uncharacterized LOC104002400 Neighboring gene late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 Neighboring gene RNA binding motif protein 15 Neighboring gene uncharacterized LOC104002403 Neighboring gene RNA binding motif protein 15 Neighboring gene small nucleolar RNA SNORA25

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables monocarboxylic acid transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in monocarboxylic acid transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
monocarboxylate transporter 5
Names
solute carrier family 16, member 4 (monocarboxylic acid transporter 5)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072398.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    120802186..120830932
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016925855.4 → XP_016781344.1  monocarboxylate transporter 5 isoform X3

    UniProtKB/TrEMBL
    A0A2J8JXG2, A0A6D2Y6X9, K6ZPE2
    Related
    ENSPTRP00000067757.1
    Conserved Domains (1) summary
    cl26868
    Location:12 → 412
    2A0111; oxalate/formate antiporter family transporter

  2. XM_016925853.4 → XP_016781342.1  monocarboxylate transporter 5 isoform X1

    UniProtKB/TrEMBL
    A0A2J8JXF7, A0A6D2X5J2, H2R2M8, K7CVH5
    Related
    ENSPTRP00000044213.4
    Conserved Domains (1) summary
    cl26868
    Location:16 → 474
    2A0111; oxalate/formate antiporter family transporter

  3. XM_063798581.1 → XP_063654651.1  monocarboxylate transporter 5 isoform X4

  4. XM_016925854.4 → XP_016781343.1  monocarboxylate transporter 5 isoform X2

    UniProtKB/TrEMBL
    A0A2J8JXG6, A0A6D2Y6T3, K7BN95
    Related
    ENSPTRP00000065292.1
    Conserved Domains (1) summary
    cl26868
    Location:16 → 426
    2A0111; oxalate/formate antiporter family transporter

  5. XM_054685521.2 → XP_054541496.1  monocarboxylate transporter 5 isoform X5

    UniProtKB/TrEMBL
    A0A2I3S3Y4, A0A2I3S791, A0A2J8JXH5, A0A6D2X3F3
Nucleotide Protein
Heading Accession and Version

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