STARD5 StAR related lipid transfer domain containing 5 [Pan troglodytes (chimpanzee)] - Gene

Summary

Official Symbol: STARD5provided by VGNC
Official Full Name: StAR related lipid transfer domain containing 5provided by VGNC
Primary source: VGNC:VGNC:3526
Locus tag: CK820_G0039750
See related: Ensembl:ENSPTRG00000007370
Gene type: protein coding
RefSeq status: MODEL
Organism: Pan troglodytes
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 16

Exon count:: 7

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2)	16	NC_072414.2 (73298799..73309989, complement)
RS_2023_04	previous assembly	NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1)	15	NC_072413.1 (73273560..73284831, complement)

Chromosome 16 - NC_072414.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

STS-H57532 (e-PCR)
- UniSTS:51215

G59841 (e-PCR)
- UniSTS:136990

RH69578 (e-PCR)
- UniSTS:41787

D15S1512 (e-PCR)
- UniSTS:39766

RH120871 (e-PCR)
- UniSTS:32365

IL16_753 (e-PCR)
- UniSTS:277365

WI-14768 (e-PCR)
- UniSTS:16526

STS-W15415 (e-PCR)
- UniSTS:38295

SHGC-12749 (e-PCR)
- UniSTS:66458

Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables cholesterol binding	IEA Inferred from Electronic Annotation more info	PubMed
enables cholesterol transfer activity	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in cholesterol import	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: stAR-related lipid transfer protein 5

Names: START domain containing 5; StAR-related lipid transfer (START) domain containing 5; StAR-related lipid transfer protein 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

NC_072414.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Range

73298799..73309989 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_523136.7 → XP_523136.2 stAR-related lipid transfer protein 5 isoform X2

See identical proteins and their annotated locations for XP_523136.2

UniProtKB/TrEMBL

A0A2J8KC72, A0A6D2X8U8, H2Q9Y5

Related

ENSPTRP00000012597.3

Conserved Domains (1) summary

cd08903
Location:6 → 211

START_STARD5-like; Lipid-binding START domain of mammalian STARD5 and related proteins
XM_016927284.3 → XP_016782773.1 stAR-related lipid transfer protein 5 isoform X1