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MEF2C myocyte enhancer factor 2C [ Pan troglodytes (chimpanzee) ]

Gene ID: 461760, updated on 2-Nov-2023

Summary

Official Symbol
MEF2Cprovided by VGNC
Official Full Name
myocyte enhancer factor 2Cprovided by VGNC
Primary source
VGNC:VGNC:4086
Locus tag
CK820_G0009223
See related
Ensembl:ENSPTRG00000024214
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
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Genomic context

See MEF2C in Genome Data Viewer
Location:
chromosome: 5
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2023_04 current NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 5 NC_072403.1 (27668630..27854061)

Chromosome 5 - NC_072403.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC104006380 Neighboring gene uncharacterized LOC129143944 Neighboring gene uncharacterized LOC112209212 Neighboring gene uncharacterized LOC112209211 Neighboring gene microRNA mir-9-2 Neighboring gene uncharacterized LOC129143945

Genomic regions, transcripts, and products

Genomic Sequence:
NC_072403.1 Chromosome 5 Reference NHGRI_mPanTro3-v1.1-hic.freeze_pri

Pathways from PubChem

General gene information

Markers

General protein information

Preferred Names
myocyte-specific enhancer factor 2C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v1.1-hic.freeze_pri

Genomic

  1. NC_072403.1 Reference NHGRI_mPanTro3-v1.1-hic.freeze_pri

    Range
    27668630..27854061
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001142658.6XP_001142658.1  myocyte-specific enhancer factor 2C isoform X4

    See identical proteins and their annotated locations for XP_001142658.1

    UniProtKB/TrEMBL
    A0A2I3THK1, A0A2J8NMP1, A0A803KLT7, K7DL77
    Related
    ENSPTRP00000088707.1
    Conserved Domains (2) summary
    cd00265
    Location:278
    MADS_MEF2_like; MEF2 (myocyte enhancer factor 2)-like/Type II subfamily of MADS ( MCM1, Agamous, Deficiens, and SRF (serum response factor) box family of eukaryotic transcriptional regulators. Binds DNA and exists as hetero and homo-dimers. Differs from SRF-like/Type I ...
    pfam12347
    Location:97150
    HJURP_C; Holliday junction regulator protein family C-terminal repeat
  2. XM_009448880.4XP_009447155.1  myocyte-specific enhancer factor 2C isoform X2

    See identical proteins and their annotated locations for XP_009447155.1

    UniProtKB/TrEMBL
    A0A2I3S1D9, A0A2I3THK1, A0A2J8NMQ6, A0A6D2WV63
    Conserved Domains (2) summary
    cd00265
    Location:278
    MADS_MEF2_like; MEF2 (myocyte enhancer factor 2)-like/Type II subfamily of MADS ( MCM1, Agamous, Deficiens, and SRF (serum response factor) box family of eukaryotic transcriptional regulators. Binds DNA and exists as hetero and homo-dimers. Differs from SRF-like/Type I ...
    pfam12347
    Location:97150
    HJURP_C; Holliday junction regulator protein family C-terminal repeat
  3. XM_054684214.1XP_054540189.1  myocyte-specific enhancer factor 2C isoform X12

    UniProtKB/TrEMBL
    A0A2I3THK1
  4. XM_009448872.4XP_009447147.1  myocyte-specific enhancer factor 2C isoform X1

    See identical proteins and their annotated locations for XP_009447147.1

    UniProtKB/TrEMBL
    A0A2I3THK1, A0A2J8NMQ7, A0A6D2XDR6, H2R001
    Conserved Domains (2) summary
    COG5068
    Location:1245
    ARG80; Regulator of arginine metabolism and related MADS box-containing transcription factors [Transcription]
    cd00265
    Location:278
    MADS_MEF2_like; MEF2 (myocyte enhancer factor 2)-like/Type II subfamily of MADS ( MCM1, Agamous, Deficiens, and SRF (serum response factor) box family of eukaryotic transcriptional regulators. Binds DNA and exists as hetero and homo-dimers. Differs from SRF-like/Type I ...
  5. XM_009448892.4XP_009447167.1  myocyte-specific enhancer factor 2C isoform X9

    See identical proteins and their annotated locations for XP_009447167.1

    UniProtKB/TrEMBL
    A0A2I3SCN8, A0A2I3THK1, A0A2J8NMR8, A0A6D2WCS8
    Related
    ENSPTRP00000074619.1
    Conserved Domains (2) summary
    COG5068
    Location:1229
    ARG80; Regulator of arginine metabolism and related MADS box-containing transcription factors [Transcription]
    cd00265
    Location:278
    MADS_MEF2_like; MEF2 (myocyte enhancer factor 2)-like/Type II subfamily of MADS ( MCM1, Agamous, Deficiens, and SRF (serum response factor) box family of eukaryotic transcriptional regulators. Binds DNA and exists as hetero and homo-dimers. Differs from SRF-like/Type I ...
  6. XM_054684208.1XP_054540183.1  myocyte-specific enhancer factor 2C isoform X6

    UniProtKB/TrEMBL
    A0A2I3THK1, A0A2J8NMP6
  7. XM_054684197.1XP_054540172.1  myocyte-specific enhancer factor 2C isoform X1

    UniProtKB/TrEMBL
    A0A2I3THK1, A0A2J8NMQ7, A0A6D2XDR6, H2R001
  8. XM_054684198.1XP_054540173.1  myocyte-specific enhancer factor 2C isoform X1

    UniProtKB/TrEMBL
    A0A2I3THK1, A0A2J8NMQ7, A0A6D2XDR6, H2R001
  9. XM_054684205.1XP_054540180.1  myocyte-specific enhancer factor 2C isoform X5

    UniProtKB/TrEMBL
    A0A2I3THK1, A0A2J8NMR2
  10. XM_054684201.1XP_054540176.1  myocyte-specific enhancer factor 2C isoform X3

    UniProtKB/TrEMBL
    A0A2I3THK1, A0A2J8NMQ5, A0A803KKS2, K7DA41
  11. XM_054684202.1XP_054540177.1  myocyte-specific enhancer factor 2C isoform X3

    UniProtKB/TrEMBL
    A0A2I3THK1, A0A2J8NMQ5, A0A803KKS2, K7DA41
  12. XM_001143507.7XP_001143507.1  myocyte-specific enhancer factor 2C isoform X1

    See identical proteins and their annotated locations for XP_001143507.1

    UniProtKB/TrEMBL
    A0A2I3THK1, A0A2J8NMQ7, A0A6D2XDR6, H2R001
    Conserved Domains (2) summary
    COG5068
    Location:1245
    ARG80; Regulator of arginine metabolism and related MADS box-containing transcription factors [Transcription]
    cd00265
    Location:278
    MADS_MEF2_like; MEF2 (myocyte enhancer factor 2)-like/Type II subfamily of MADS ( MCM1, Agamous, Deficiens, and SRF (serum response factor) box family of eukaryotic transcriptional regulators. Binds DNA and exists as hetero and homo-dimers. Differs from SRF-like/Type I ...
  13. XM_054684204.1XP_054540179.1  myocyte-specific enhancer factor 2C isoform X5

    UniProtKB/TrEMBL
    A0A2I3THK1, A0A2J8NMR2
  14. XM_054684200.1XP_054540175.1  myocyte-specific enhancer factor 2C isoform X3

    UniProtKB/TrEMBL
    A0A2I3THK1, A0A2J8NMQ5, A0A803KKS2, K7DA41
  15. XM_054684207.1XP_054540182.1  myocyte-specific enhancer factor 2C isoform X6

    UniProtKB/TrEMBL
    A0A2I3THK1, A0A2J8NMP6
  16. XM_054684209.1XP_054540184.1  myocyte-specific enhancer factor 2C isoform X7

    UniProtKB/TrEMBL
    A0A2I3THK1, A0A2J8NMN7
  17. XM_054684212.1XP_054540187.1  myocyte-specific enhancer factor 2C isoform X10

    UniProtKB/TrEMBL
    A0A2J8NMT7
  18. XM_054684210.1XP_054540185.1  myocyte-specific enhancer factor 2C isoform X8

    UniProtKB/TrEMBL
    A0A2I3THK1
  19. XM_054684211.1XP_054540186.1  myocyte-specific enhancer factor 2C isoform X10

    UniProtKB/TrEMBL
    A0A2J8NMT7
  20. XM_009448874.4XP_009447149.1  myocyte-specific enhancer factor 2C isoform X1

    See identical proteins and their annotated locations for XP_009447149.1

    UniProtKB/TrEMBL
    A0A2I3THK1, A0A2J8NMQ7, A0A6D2XDR6, H2R001
    Conserved Domains (2) summary
    COG5068
    Location:1245
    ARG80; Regulator of arginine metabolism and related MADS box-containing transcription factors [Transcription]
    cd00265
    Location:278
    MADS_MEF2_like; MEF2 (myocyte enhancer factor 2)-like/Type II subfamily of MADS ( MCM1, Agamous, Deficiens, and SRF (serum response factor) box family of eukaryotic transcriptional regulators. Binds DNA and exists as hetero and homo-dimers. Differs from SRF-like/Type I ...
  21. XM_054684203.1XP_054540178.1  myocyte-specific enhancer factor 2C isoform X5

    UniProtKB/TrEMBL
    A0A2I3THK1, A0A2J8NMR2
  22. XM_054684199.1XP_054540174.1  myocyte-specific enhancer factor 2C isoform X3

    UniProtKB/TrEMBL
    A0A2I3THK1, A0A2J8NMQ5, A0A803KKS2, K7DA41
  23. XM_054684206.1XP_054540181.1  myocyte-specific enhancer factor 2C isoform X6

    UniProtKB/TrEMBL
    A0A2I3THK1, A0A2J8NMP6
  24. XM_009448879.3XP_009447154.1  myocyte-specific enhancer factor 2C isoform X1

    See identical proteins and their annotated locations for XP_009447154.1

    UniProtKB/TrEMBL
    A0A2I3THK1, A0A2J8NMQ7, A0A6D2XDR6, H2R001
    Conserved Domains (2) summary
    COG5068
    Location:1245
    ARG80; Regulator of arginine metabolism and related MADS box-containing transcription factors [Transcription]
    cd00265
    Location:278
    MADS_MEF2_like; MEF2 (myocyte enhancer factor 2)-like/Type II subfamily of MADS ( MCM1, Agamous, Deficiens, and SRF (serum response factor) box family of eukaryotic transcriptional regulators. Binds DNA and exists as hetero and homo-dimers. Differs from SRF-like/Type I ...
  25. XM_054684213.1XP_054540188.1  myocyte-specific enhancer factor 2C isoform X11

    UniProtKB/TrEMBL
    A0A2J8NMS6