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MEF2C myocyte enhancer factor 2C [ Pan troglodytes (chimpanzee) ]

Gene ID: 461760, updated on 10-Oct-2024

Summary

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Official Symbol
MEF2Cprovided by VGNC
Official Full Name
myocyte enhancer factor 2Cprovided by VGNC
Primary source
VGNC:VGNC:4086
Locus tag
CK820_G0009223
See related
Ensembl:ENSPTRG00000024214
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See MEF2C in Genome Data Viewer
Location:
chromosome: 4
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 4 NC_072402.2 (27262273..27428652)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 5 NC_072403.1 (27668630..27854061)

Chromosome 4 - NC_072402.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC129143943 Neighboring gene uncharacterized LOC134809955 Neighboring gene uncharacterized LOC107974662 Neighboring gene uncharacterized LOC112209212 Neighboring gene uncharacterized LOC112209211 Neighboring gene microRNA mir-9-2 Neighboring gene uncharacterized LOC104006383 Neighboring gene small ribosomal subunit protein eS1-like Neighboring gene small nucleolar RNA SNORA70

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables histone deacetylase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
myocyte-specific enhancer factor 2C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072402.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    27262273..27428652
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054684198.2 → XP_054540173.1  myocyte-specific enhancer factor 2C isoform X1

    UniProtKB/TrEMBL
    A0A2J8NMQ7, A0A6D2XDR6, H2R001

  2. XM_054684205.2 → XP_054540180.1  myocyte-specific enhancer factor 2C isoform X5

    UniProtKB/TrEMBL
    A0A2J8NMR2

  3. XM_054684202.2 → XP_054540177.1  myocyte-specific enhancer factor 2C isoform X3

    UniProtKB/TrEMBL
    A0A2J8NMQ5, A0A803KKS2, K7DA41

  4. XM_009448872.5 → XP_009447147.1  myocyte-specific enhancer factor 2C isoform X1

    See identical proteins and their annotated locations for XP_009447147.1

    UniProtKB/TrEMBL
    A0A2I3THK1, A0A2J8NMQ7, A0A6D2XDR6, H2R001
    Conserved Domains (2) summary
    COG5068
    Location:1 → 245
    ARG80; Regulator of arginine metabolism and related MADS box-containing transcription factors [Transcription]
    cd00265
    Location:2 → 78
    MADS_MEF2_like; MEF2 (myocyte enhancer factor 2)-like/Type II subfamily of MADS ( MCM1, Agamous, Deficiens, and SRF (serum response factor) box family of eukaryotic transcriptional regulators. Binds DNA and exists as hetero and homo-dimers. Differs from SRF-like/Type I ...

  5. XM_054684201.2 → XP_054540176.1  myocyte-specific enhancer factor 2C isoform X3

    UniProtKB/TrEMBL
    A0A2J8NMQ5, A0A803KKS2, K7DA41

  6. XM_063810299.1 → XP_063666369.1  myocyte-specific enhancer factor 2C isoform X3

    UniProtKB/TrEMBL
    A0A2J8NMQ5, A0A803KKS2, K7DA41

  7. XM_063810288.1 → XP_063666358.1  myocyte-specific enhancer factor 2C isoform X1

    UniProtKB/TrEMBL
    A0A2J8NMQ7, A0A6D2XDR6, H2R001

  8. XM_063810315.1 → XP_063666385.1  myocyte-specific enhancer factor 2C isoform X6

    UniProtKB/TrEMBL
    A0A2J8NMP6

  9. XM_063810291.1 → XP_063666361.1  myocyte-specific enhancer factor 2C isoform X2

    UniProtKB/TrEMBL
    A0A2I3S1D9, A0A2J8NMQ6, A0A6D2WV63

  10. XM_063810301.1 → XP_063666371.1  myocyte-specific enhancer factor 2C isoform X3

    UniProtKB/TrEMBL
    A0A2J8NMQ5, A0A803KKS2, K7DA41

  11. XM_063810316.1 → XP_063666386.1  myocyte-specific enhancer factor 2C isoform X6

    UniProtKB/TrEMBL
    A0A2J8NMP6

  12. XM_063810322.1 → XP_063666392.1  myocyte-specific enhancer factor 2C isoform X8

  13. XM_063810300.1 → XP_063666370.1  myocyte-specific enhancer factor 2C isoform X3

    UniProtKB/TrEMBL
    A0A2J8NMQ5, A0A803KKS2, K7DA41

  14. XM_063810317.1 → XP_063666387.1  myocyte-specific enhancer factor 2C isoform X6

    UniProtKB/TrEMBL
    A0A2J8NMP6

  15. XM_063810306.1 → XP_063666376.1  myocyte-specific enhancer factor 2C isoform X4

    UniProtKB/TrEMBL
    A0A2J8NMP1, A0A803KLT7, K7DL77

  16. XM_063810321.1 → XP_063666391.1  myocyte-specific enhancer factor 2C isoform X7

    UniProtKB/TrEMBL
    A0A2J8NMN7

  17. XM_063810295.1 → XP_063666365.1  myocyte-specific enhancer factor 2C isoform X3

    UniProtKB/TrEMBL
    A0A2J8NMQ5, A0A803KKS2, K7DA41

  18. XM_063810311.1 → XP_063666381.1  myocyte-specific enhancer factor 2C isoform X6

    UniProtKB/TrEMBL
    A0A2J8NMP6

  19. XM_063810297.1 → XP_063666367.1  myocyte-specific enhancer factor 2C isoform X3

    UniProtKB/TrEMBL
    A0A2J8NMQ5, A0A803KKS2, K7DA41

  20. XM_063810313.1 → XP_063666383.1  myocyte-specific enhancer factor 2C isoform X6

    UniProtKB/TrEMBL
    A0A2J8NMP6

  21. XM_063810304.1 → XP_063666374.1  myocyte-specific enhancer factor 2C isoform X4

    UniProtKB/TrEMBL
    A0A2J8NMP1, A0A803KLT7, K7DL77

  22. XM_063810319.1 → XP_063666389.1  myocyte-specific enhancer factor 2C isoform X7

    UniProtKB/TrEMBL
    A0A2J8NMN7

  23. XM_063810305.1 → XP_063666375.1  myocyte-specific enhancer factor 2C isoform X4

    UniProtKB/TrEMBL
    A0A2J8NMP1, A0A803KLT7, K7DL77

  24. XM_063810320.1 → XP_063666390.1  myocyte-specific enhancer factor 2C isoform X7

    UniProtKB/TrEMBL
    A0A2J8NMN7

  25. XM_063810293.1 → XP_063666363.1  myocyte-specific enhancer factor 2C isoform X3

    UniProtKB/TrEMBL
    A0A2J8NMQ5, A0A803KKS2, K7DA41

  26. XM_063810292.1 → XP_063666362.1  myocyte-specific enhancer factor 2C isoform X3

    UniProtKB/TrEMBL
    A0A2J8NMQ5, A0A803KKS2, K7DA41

  27. XM_063810285.1 → XP_063666355.1  myocyte-specific enhancer factor 2C isoform X1

    UniProtKB/TrEMBL
    A0A2J8NMQ7, A0A6D2XDR6, H2R001

  28. XM_063810308.1 → XP_063666378.1  myocyte-specific enhancer factor 2C isoform X6

    UniProtKB/TrEMBL
    A0A2J8NMP6

  29. XM_063810302.1 → XP_063666372.1  myocyte-specific enhancer factor 2C isoform X4

    UniProtKB/TrEMBL
    A0A2J8NMP1, A0A803KLT7, K7DL77

  30. XM_063810287.1 → XP_063666357.1  myocyte-specific enhancer factor 2C isoform X1

    UniProtKB/TrEMBL
    A0A2J8NMQ7, A0A6D2XDR6, H2R001

  31. XM_063810318.1 → XP_063666388.1  myocyte-specific enhancer factor 2C isoform X7

    UniProtKB/TrEMBL
    A0A2J8NMN7

  32. XM_063810310.1 → XP_063666380.1  myocyte-specific enhancer factor 2C isoform X6

    UniProtKB/TrEMBL
    A0A2J8NMP6

  33. XM_063810303.1 → XP_063666373.1  myocyte-specific enhancer factor 2C isoform X4

    UniProtKB/TrEMBL
    A0A2J8NMP1, A0A803KLT7, K7DL77

  34. XM_063810323.1 → XP_063666393.1  myocyte-specific enhancer factor 2C isoform X9

  35. XM_009448874.5 → XP_009447149.1  myocyte-specific enhancer factor 2C isoform X1

    See identical proteins and their annotated locations for XP_009447149.1

    UniProtKB/TrEMBL
    A0A2I3THK1, A0A2J8NMQ7, A0A6D2XDR6, H2R001
    Conserved Domains (2) summary
    COG5068
    Location:1 → 245
    ARG80; Regulator of arginine metabolism and related MADS box-containing transcription factors [Transcription]
    cd00265
    Location:2 → 78
    MADS_MEF2_like; MEF2 (myocyte enhancer factor 2)-like/Type II subfamily of MADS ( MCM1, Agamous, Deficiens, and SRF (serum response factor) box family of eukaryotic transcriptional regulators. Binds DNA and exists as hetero and homo-dimers. Differs from SRF-like/Type I ...

  36. XM_054684203.2 → XP_054540178.1  myocyte-specific enhancer factor 2C isoform X5

    UniProtKB/TrEMBL
    A0A2J8NMR2

  37. XM_054684199.2 → XP_054540174.1  myocyte-specific enhancer factor 2C isoform X3

    UniProtKB/TrEMBL
    A0A2J8NMQ5, A0A803KKS2, K7DA41

  38. XM_063810290.1 → XP_063666360.1  myocyte-specific enhancer factor 2C isoform X2

    UniProtKB/TrEMBL
    A0A2I3S1D9, A0A2J8NMQ6, A0A6D2WV63

  39. XM_001143507.8 → XP_001143507.1  myocyte-specific enhancer factor 2C isoform X1

    See identical proteins and their annotated locations for XP_001143507.1

    UniProtKB/TrEMBL
    A0A2I3THK1, A0A2J8NMQ7, A0A6D2XDR6, H2R001
    Conserved Domains (2) summary
    COG5068
    Location:1 → 245
    ARG80; Regulator of arginine metabolism and related MADS box-containing transcription factors [Transcription]
    cd00265
    Location:2 → 78
    MADS_MEF2_like; MEF2 (myocyte enhancer factor 2)-like/Type II subfamily of MADS ( MCM1, Agamous, Deficiens, and SRF (serum response factor) box family of eukaryotic transcriptional regulators. Binds DNA and exists as hetero and homo-dimers. Differs from SRF-like/Type I ...

  40. XM_054684204.2 → XP_054540179.1  myocyte-specific enhancer factor 2C isoform X5

    UniProtKB/TrEMBL
    A0A2J8NMR2

  41. XM_054684200.2 → XP_054540175.1  myocyte-specific enhancer factor 2C isoform X3

    UniProtKB/TrEMBL
    A0A2J8NMQ5, A0A803KKS2, K7DA41

  42. XM_063810289.1 → XP_063666359.1  myocyte-specific enhancer factor 2C isoform X2

    UniProtKB/TrEMBL
    A0A2I3S1D9, A0A2J8NMQ6, A0A6D2WV63

  43. XM_063810294.1 → XP_063666364.1  myocyte-specific enhancer factor 2C isoform X3

    UniProtKB/TrEMBL
    A0A2J8NMQ5, A0A803KKS2, K7DA41

  44. XM_063810286.1 → XP_063666356.1  myocyte-specific enhancer factor 2C isoform X1

    UniProtKB/TrEMBL
    A0A2J8NMQ7, A0A6D2XDR6, H2R001

  45. XM_063810309.1 → XP_063666379.1  myocyte-specific enhancer factor 2C isoform X6

    UniProtKB/TrEMBL
    A0A2J8NMP6

  46. XM_063810307.1 → XP_063666377.1  myocyte-specific enhancer factor 2C isoform X5

    UniProtKB/TrEMBL
    A0A2J8NMR2

  47. XM_063810296.1 → XP_063666366.1  myocyte-specific enhancer factor 2C isoform X3

    UniProtKB/TrEMBL
    A0A2J8NMQ5, A0A803KKS2, K7DA41

  48. XM_063810312.1 → XP_063666382.1  myocyte-specific enhancer factor 2C isoform X6

    UniProtKB/TrEMBL
    A0A2J8NMP6

  49. XM_063810298.1 → XP_063666368.1  myocyte-specific enhancer factor 2C isoform X3

    UniProtKB/TrEMBL
    A0A2J8NMQ5, A0A803KKS2, K7DA41

  50. XM_063810314.1 → XP_063666384.1  myocyte-specific enhancer factor 2C isoform X6

    UniProtKB/TrEMBL
    A0A2J8NMP6
Nucleotide Protein
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