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PPARG peroxisome proliferator activated receptor gamma [ Pan troglodytes (chimpanzee) ]

Gene ID: 460178, updated on 25-Jul-2024

Summary

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Official Symbol
PPARGprovided by VGNC
Official Full Name
peroxisome proliferator activated receptor gammaprovided by VGNC
Primary source
VGNC:VGNC:7994
See related
Ensembl:ENSPTRG00000014632
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See PPARG in Genome Data Viewer
Location:
chromosome: 2
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 2 NC_086015.1 (16297905..16444509)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 3 NC_072401.1 (16297755..16444182)

Chromosome 2 - NC_086015.1Genomic Context describing neighboring genes Neighboring gene synapsin II Neighboring gene TIMP metallopeptidase inhibitor 4 Neighboring gene glutathione S-transferase Mu 1-like Neighboring gene U6 spliceosomal RNA Neighboring gene tRNA splicing endonuclease subunit 2 Neighboring gene MKRN2 opposite strand Neighboring gene makorin ring finger protein 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription repressor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nuclear receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in hormone-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of cholesterol storage IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of inflammatory response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
peroxisome proliferator-activated receptor gamma
Names
peroxisome proliferative activated receptor gamma

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_086015.1 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    16297905..16444509
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009444919.5 → XP_009443194.3  peroxisome proliferator-activated receptor gamma isoform X2

    UniProtKB/TrEMBL
    H2R8F6

  2. XM_016940491.4 → XP_016795980.2  peroxisome proliferator-activated receptor gamma isoform X2

    UniProtKB/TrEMBL
    H2R8F6

  3. XM_063806609.1 → XP_063662679.1  peroxisome proliferator-activated receptor gamma isoform X4

    UniProtKB/TrEMBL
    A0A2I3SD74

  4. XM_063806610.1 → XP_063662680.1  peroxisome proliferator-activated receptor gamma isoform X4

    UniProtKB/TrEMBL
    A0A2I3SD74

  5. XM_016940490.4 → XP_016795979.2  peroxisome proliferator-activated receptor gamma isoform X2

    UniProtKB/TrEMBL
    H2R8F6

  6. XM_016940492.4 → XP_016795981.2  peroxisome proliferator-activated receptor gamma isoform X2

    UniProtKB/TrEMBL
    H2R8F6

  7. XM_016940493.4 → XP_016795982.2  peroxisome proliferator-activated receptor gamma isoform X2

    UniProtKB/TrEMBL
    H2R8F6

  8. XM_009444916.5 → XP_009443191.3  peroxisome proliferator-activated receptor gamma isoform X2

    UniProtKB/TrEMBL
    H2R8F6

  9. XM_009444917.5 → XP_009443192.3  peroxisome proliferator-activated receptor gamma isoform X2

    UniProtKB/TrEMBL
    H2R8F6

  10. XM_009444915.5 → XP_009443190.3  peroxisome proliferator-activated receptor gamma isoform X2

    UniProtKB/TrEMBL
    H2R8F6

  11. XM_024355335.3 → XP_024211103.2  peroxisome proliferator-activated receptor gamma isoform X3

    UniProtKB/TrEMBL
    A0A2I3SD74

  12. XM_016940489.4 → XP_016795978.2  peroxisome proliferator-activated receptor gamma isoform X1

    UniProtKB/TrEMBL
    A0A2I3SI31
Nucleotide Protein
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