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POU2AF1 POU class 2 homeobox associating factor 1 [ Pan troglodytes (chimpanzee) ]

Gene ID: 451537, updated on 17-Aug-2024

Summary

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Official Symbol
POU2AF1provided by VGNC
Official Full Name
POU class 2 homeobox associating factor 1provided by VGNC
Primary source
VGNC:VGNC:1045
Locus tag
CK820_G0034414
See related
Ensembl:ENSPTRG00000004264
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 9
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 9 NC_072407.2 (113330188..113357687, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 11 NC_072409.1 (112552381..112579673, complement)

Chromosome 9 - NC_072407.2Genomic Context describing neighboring genes Neighboring gene POU class 2 homeobox associating factor 2 Neighboring gene POU class 2 homeobox associating factor 3 Neighboring gene U2 spliceosomal RNA Neighboring gene uncharacterized LOC129136329

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables POU domain binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of RNA polymerase II transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
POU domain class 2-associating factor 1
Names
POU class 2 associating factor 1
POU domain, class 2, associating factor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072407.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    113330188..113357687 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_508747.8 → XP_508747.4  POU domain class 2-associating factor 1 isoform X2

    UniProtKB/TrEMBL
    A0A2J8L0I9, A0A6D2VXF8, A2T7E0, H2Q4R0

  2. XM_009424138.5 → XP_009422413.3  POU domain class 2-associating factor 1 isoform X1

    UniProtKB/TrEMBL
    A0A2I3T8Q4, A2T7E0

  3. XM_063783398.1 → XP_063639468.1  POU domain class 2-associating factor 1 isoform X1

    UniProtKB/TrEMBL
    A0A2I3T8Q4, A2T7E0
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials