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OGT O-linked N-acetylglucosamine (GlcNAc) transferase [ Gallus gallus (chicken) ]

Gene ID: 422203, updated on 17-Aug-2024

Summary

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Symbol
OGTprovided by CGNC
Full Name
O-linked N-acetylglucosamine (GlcNAc) transferaseprovided by CGNC
Primary source
CGNC:4043
See related
Ensembl:ENSGALG00010016932
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
22
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 4 NC_052535.1 (2155535..2173315, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 4 NC_052576.1 (2191957..2209737, complement)

Chromosome 4 - NC_052535.1Genomic Context describing neighboring genes Neighboring gene BRCA1/BRCA2-containing complex subunit 3 Neighboring gene germ cell nuclear acidic peptidase Neighboring gene TATA-box binding protein associated factor 1 Neighboring gene RHOG family member 2 Neighboring gene uncharacterized LOC121110551

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit
Names
O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)
XP_001232519.1
XP_004940687.1
XP_040525459.1
XP_040525460.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052535.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    2155535..2173315 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001232518.7 → XP_001232519.1  UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit isoform X2

    UniProtKB/TrEMBL
    F1NX56
    Conserved Domains (3) summary
    TIGR02917
    Location:23 → 455
    PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
    sd00006
    Location:317 → 345
    TPR; TPR repeat [structural motif]
    pfam13844
    Location:466 → 1005
    Glyco_transf_41; Glycosyl transferase family 41

  2. XM_004940630.5 → XP_004940687.1  UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit isoform X1

    UniProtKB/TrEMBL
    A0A8V0YYY4
    Related
    ENSGALP00010023858.1, ENSGALT00010040894.1
    Conserved Domains (3) summary
    TIGR02917
    Location:22 → 465
    PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
    sd00006
    Location:327 → 355
    TPR; TPR repeat [structural motif]
    pfam13844
    Location:476 → 1015
    Glyco_transf_41; Glycosyl transferase family 41

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052576.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    2191957..2209737 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040669526.2 → XP_040525460.1  UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit isoform X2

    Conserved Domains (3) summary
    TIGR02917
    Location:23 → 455
    PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
    sd00006
    Location:317 → 345
    TPR; TPR repeat [structural motif]
    pfam13844
    Location:466 → 1005
    Glyco_transf_41; Glycosyl transferase family 41

  2. XM_040669525.2 → XP_040525459.1  UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit isoform X1

    UniProtKB/TrEMBL
    A0A8V0YYY4
    Conserved Domains (3) summary
    TIGR02917
    Location:22 → 465
    PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
    sd00006
    Location:327 → 355
    TPR; TPR repeat [structural motif]
    pfam13844
    Location:476 → 1015
    Glyco_transf_41; Glycosyl transferase family 41

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001006429.1: Suppressed sequence

    Description
    NM_001006429.1: This RefSeq was suppressed temporarily based on the calculation that the annotated protein was shorter than a protein or proteins from a putative ortholog.
Nucleotide Protein Strain
Heading Accession and Version

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