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MYT1 myelin transcription factor 1 [ Gallus gallus (chicken) ]

Gene ID: 419249, updated on 17-Aug-2024

Summary

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Official Symbol
MYT1provided by CGNC
Official Full Name
myelin transcription factor 1provided by CGNC
Primary source
CGNC:4432
See related
Ensembl:ENSGALG00010023242
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
cMYT1
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 20
Exon count:
24
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 20 NC_052551.1 (9442897..9499310, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 20 NC_052592.1 (9225058..9281456, complement)

Chromosome 20 - NC_052551.1Genomic Context describing neighboring genes Neighboring gene peroxidasin like Neighboring gene protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 Neighboring gene uncharacterized LOC419250 Neighboring gene neuropeptides B and W receptor 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The fringe molecules induce endocrine differentiation in embryonic endoderm by activating cMyt1/cMyt3. Xu Y, et al. Dev Biol, 2006 Sep 15. PMID 16920096

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
myelin transcription factor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052551.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    9442897..9499310 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015296628.4 → XP_015152114.1  myelin transcription factor 1 isoform X4

    Conserved Domains (3) summary
    PLN02713
    Location:487 → 532
    PLN02713; Probable pectinesterase/pectinesterase inhibitor
    pfam01530
    Location:865 → 893
    zf-C2HC; Zinc finger, C2HC type
    pfam08474
    Location:555 → 813
    MYT1; Myelin transcription factor 1

  2. XM_025142351.3 → XP_024998119.1  myelin transcription factor 1 isoform X6

    Conserved Domains (3) summary
    PLN02713
    Location:527 → 572
    PLN02713; Probable pectinesterase/pectinesterase inhibitor
    pfam01530
    Location:855 → 883
    zf-C2HC; Zinc finger, C2HC type
    pfam08474
    Location:595 → 826
    MYT1; Myelin transcription factor 1

  3. XM_015296627.4 → XP_015152113.1  myelin transcription factor 1 isoform X3

    Conserved Domains (3) summary
    PLN02713
    Location:527 → 572
    PLN02713; Probable pectinesterase/pectinesterase inhibitor
    pfam01530
    Location:878 → 906
    zf-C2HC; Zinc finger, C2HC type
    pfam08474
    Location:595 → 826
    MYT1; Myelin transcription factor 1

  4. XM_015296626.4 → XP_015152112.1  myelin transcription factor 1 isoform X2

    UniProtKB/TrEMBL
    A0A8V0ZZS8
    Related
    ENSGALP00010034414.1, ENSGALT00010056672.1
    Conserved Domains (3) summary
    PLN02713
    Location:527 → 572
    PLN02713; Probable pectinesterase/pectinesterase inhibitor
    pfam01530
    Location:882 → 910
    zf-C2HC; Zinc finger, C2HC type
    pfam08474
    Location:595 → 853
    MYT1; Myelin transcription factor 1

  5. XM_015296625.4 → XP_015152111.1  myelin transcription factor 1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZM15
    Related
    ENSGALP00010034418.1, ENSGALT00010056676.1
    Conserved Domains (3) summary
    PLN02713
    Location:527 → 572
    PLN02713; Probable pectinesterase/pectinesterase inhibitor
    pfam01530
    Location:905 → 933
    zf-C2HC; Zinc finger, C2HC type
    pfam08474
    Location:595 → 853
    MYT1; Myelin transcription factor 1

  6. XM_040650958.2 → XP_040506892.1  myelin transcription factor 1 isoform X7

    Conserved Domains (1) summary
    PLN02713
    Location:485 → 530
    PLN02713; Probable pectinesterase/pectinesterase inhibitor

  7. XM_015296630.4 → XP_015152116.1  myelin transcription factor 1 isoform X5

    UniProtKB/TrEMBL
    A0A1D5PN28
    Conserved Domains (3) summary
    PLN02713
    Location:485 → 530
    PLN02713; Probable pectinesterase/pectinesterase inhibitor
    pfam01530
    Location:863 → 891
    zf-C2HC; Zinc finger, C2HC type
    pfam08474
    Location:553 → 811
    MYT1; Myelin transcription factor 1

  8. XM_015296629.4 → XP_015152115.1  myelin transcription factor 1 isoform X5

    UniProtKB/TrEMBL
    A0A1D5PN28
    Conserved Domains (3) summary
    PLN02713
    Location:485 → 530
    PLN02713; Probable pectinesterase/pectinesterase inhibitor
    pfam01530
    Location:863 → 891
    zf-C2HC; Zinc finger, C2HC type
    pfam08474
    Location:553 → 811
    MYT1; Myelin transcription factor 1

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052592.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    9225058..9281456 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040688121.2 → XP_040544055.1  myelin transcription factor 1 isoform X4

    Conserved Domains (3) summary
    PLN02713
    Location:487 → 532
    PLN02713; Probable pectinesterase/pectinesterase inhibitor
    pfam01530
    Location:865 → 893
    zf-C2HC; Zinc finger, C2HC type
    pfam08474
    Location:555 → 813
    MYT1; Myelin transcription factor 1

  2. XM_040688124.2 → XP_040544058.1  myelin transcription factor 1 isoform X6

    Conserved Domains (3) summary
    PLN02713
    Location:527 → 572
    PLN02713; Probable pectinesterase/pectinesterase inhibitor
    pfam01530
    Location:855 → 883
    zf-C2HC; Zinc finger, C2HC type
    pfam08474
    Location:595 → 826
    MYT1; Myelin transcription factor 1

  3. XM_040688120.2 → XP_040544054.1  myelin transcription factor 1 isoform X3

    Conserved Domains (3) summary
    PLN02713
    Location:527 → 572
    PLN02713; Probable pectinesterase/pectinesterase inhibitor
    pfam01530
    Location:878 → 906
    zf-C2HC; Zinc finger, C2HC type
    pfam08474
    Location:595 → 826
    MYT1; Myelin transcription factor 1

  4. XM_040688119.2 → XP_040544053.1  myelin transcription factor 1 isoform X2

    UniProtKB/TrEMBL
    A0A8V0ZZS8
    Conserved Domains (3) summary
    PLN02713
    Location:527 → 572
    PLN02713; Probable pectinesterase/pectinesterase inhibitor
    pfam01530
    Location:882 → 910
    zf-C2HC; Zinc finger, C2HC type
    pfam08474
    Location:595 → 853
    MYT1; Myelin transcription factor 1

  5. XM_040688118.2 → XP_040544052.1  myelin transcription factor 1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZM15
    Conserved Domains (3) summary
    PLN02713
    Location:527 → 572
    PLN02713; Probable pectinesterase/pectinesterase inhibitor
    pfam01530
    Location:905 → 933
    zf-C2HC; Zinc finger, C2HC type
    pfam08474
    Location:595 → 853
    MYT1; Myelin transcription factor 1

  6. XM_040688125.2 → XP_040544059.1  myelin transcription factor 1 isoform X7

    Conserved Domains (1) summary
    PLN02713
    Location:485 → 530
    PLN02713; Probable pectinesterase/pectinesterase inhibitor

  7. XM_040688122.2 → XP_040544056.1  myelin transcription factor 1 isoform X5

    Conserved Domains (3) summary
    PLN02713
    Location:485 → 530
    PLN02713; Probable pectinesterase/pectinesterase inhibitor
    pfam01530
    Location:863 → 891
    zf-C2HC; Zinc finger, C2HC type
    pfam08474
    Location:553 → 811
    MYT1; Myelin transcription factor 1

  8. XM_040688123.2 → XP_040544057.1  myelin transcription factor 1 isoform X5

    Conserved Domains (3) summary
    PLN02713
    Location:485 → 530
    PLN02713; Probable pectinesterase/pectinesterase inhibitor
    pfam01530
    Location:863 → 891
    zf-C2HC; Zinc finger, C2HC type
    pfam08474
    Location:553 → 811
    MYT1; Myelin transcription factor 1
Nucleotide Protein Strain
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