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RPL21 ribosomal protein L21 [ Gallus gallus (chicken) ]

Gene ID: 418933, updated on 17-Aug-2024

Summary

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Symbol
RPL21provided by CGNC
Full Name
ribosomal protein L21provided by CGNC
Primary source
CGNC:66325
See related
Ensembl:ENSGALG00010005785
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
RPL21P16
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
6
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (176157666..176162171, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (176241303..176245816, complement)

Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene mitochondrial translational initiation factor 3 Neighboring gene general transcription factor IIIA Neighboring gene small nucleolar RNA SNORA27 Neighboring gene small nucleolar RNA SNORD102 Neighboring gene RAS like family 11 member A Neighboring gene ubiquitin specific peptidase 12 Neighboring gene uncharacterized LOC112531580

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Systematic identification and characterization of chicken (Gallus gallus) ncRNAs. Zhang Y, et al. Nucleic Acids Res, 2009 Oct. PMID 19720738, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytosolic large ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
60S ribosomal protein L21
Names
ribosomal protein L21 pseudogene 16
XP_001233393.1
XP_040514334.1
XP_040514335.1
XP_040514337.1
XP_040559944.1
XP_046765176.1
XP_046770273.1
XP_417127.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    176157666..176162171 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_417127.8 → XP_417127.1  60S ribosomal protein L21 isoform X1

    See identical proteins and their annotated locations for XP_417127.1

    UniProtKB/TrEMBL
    R4GIQ2
    Conserved Domains (1) summary
    PTZ00189
    Location:1 → 160
    PTZ00189; 60S ribosomal protein L21; Provisional

  2. XM_046914317.1 → XP_046770273.1  60S ribosomal protein L21 isoform X2

  3. XM_001233392.6 → XP_001233393.1  60S ribosomal protein L21 isoform X1

    See identical proteins and their annotated locations for XP_001233393.1

    UniProtKB/TrEMBL
    R4GIQ2
    Related
    ENSGALP00010008160.1, ENSGALT00010013789.1
    Conserved Domains (1) summary
    PTZ00189
    Location:1 → 160
    PTZ00189; 60S ribosomal protein L21; Provisional

  4. XM_040704010.2 → XP_040559944.1  60S ribosomal protein L21 isoform X2

    Conserved Domains (1) summary
    PTZ00189
    Location:1 → 135
    PTZ00189; 60S ribosomal protein L21; Provisional

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    176241303..176245816 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040658401.2 → XP_040514335.1  60S ribosomal protein L21 isoform X1

    UniProtKB/TrEMBL
    R4GIQ2
    Conserved Domains (1) summary
    PTZ00189
    Location:1 → 160
    PTZ00189; 60S ribosomal protein L21; Provisional

  2. XM_046909220.1 → XP_046765176.1  60S ribosomal protein L21 isoform X2

  3. XM_040658400.2 → XP_040514334.1  60S ribosomal protein L21 isoform X1

    UniProtKB/TrEMBL
    R4GIQ2
    Conserved Domains (1) summary
    PTZ00189
    Location:1 → 160
    PTZ00189; 60S ribosomal protein L21; Provisional

  4. XM_040658403.2 → XP_040514337.1  60S ribosomal protein L21 isoform X2

    Conserved Domains (1) summary
    PTZ00189
    Location:1 → 135
    PTZ00189; 60S ribosomal protein L21; Provisional
Nucleotide Protein Strain
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