U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SCPEP1 serine carboxypeptidase 1 [ Gallus gallus (chicken) ]

Gene ID: 417403, updated on 17-Aug-2024

Summary

Go to the top of the page Help
Symbol
SCPEP1provided by CGNC
Full Name
serine carboxypeptidase 1provided by CGNC
Primary source
CGNC:2313
See related
Ensembl:ENSGALG00010029582
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 18
Exon count:
13
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 18 NC_052549.1 (6926983..6937683)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 18 NC_052590.1 (6522144..6532851)

Chromosome 18 - NC_052549.1Genomic Context describing neighboring genes Neighboring gene diacylglycerol kinase epsilon Neighboring gene tripartite motif containing 25 Neighboring gene uncharacterized LOC107052249 Neighboring gene coilin Neighboring gene RAB11 family interacting protein 4 Neighboring gene uncharacterized LOC124417295 Neighboring gene transfer RNA threonine (anticodon CGU)

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables serine-type carboxypeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
retinoid-inducible serine carboxypeptidase
NP_001012821.1
XP_015135362.1
XP_046757984.1
XP_046785351.1
XP_046785352.1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001012803.2 → NP_001012821.1  retinoid-inducible serine carboxypeptidase precursor

    See identical proteins and their annotated locations for NP_001012821.1

    Status: PROVISIONAL

    Source sequence(s)
    JAENSK010000317
    UniProtKB/TrEMBL
    A0A8V1AJ84, Q5F3W4
    Conserved Domains (1) summary
    cl08270
    Location:29 → 439
    Peptidase_S10; Serine carboxypeptidase

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052549.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    6926983..6937683
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015279876.4 → XP_015135362.1  retinoid-inducible serine carboxypeptidase isoform X1

    UniProtKB/TrEMBL
    A0A8V1AJ84, A0A8V1APA8
    Related
    ENSGALP00010044195.1, ENSGALT00010071505.1
    Conserved Domains (1) summary
    cl08270
    Location:29 → 432
    Peptidase_S10; Serine carboxypeptidase

  2. XM_046902028.1 → XP_046757984.1  retinoid-inducible serine carboxypeptidase isoform X2

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052590.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    6522144..6532851
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046929395.1 → XP_046785351.1  retinoid-inducible serine carboxypeptidase isoform X1

    UniProtKB/TrEMBL
    A0A8V1AJ84, A0A8V1APA8

  2. XM_046929396.1 → XP_046785352.1  retinoid-inducible serine carboxypeptidase isoform X2

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials