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BMS1P1 BMS1 pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 399761, updated on 23-Nov-2021

Summary

Official Symbol
BMS1P1provided by HGNC
Official Full Name
BMS1 pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:23649
See related
Ensembl:ENSG00000204177
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
BMS1P5; BMS1LP1; BMS1LP5
Expression
Ubiquitous expression in duodenum (RPKM 4.6), small intestine (RPKM 3.8) and 25 other tissues See more
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Genomic context

See BMS1P1 in Genome Data Viewer
Location:
10q11.22
Exon count:
9
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 10 NC_000010.11 (46786733..46811989)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (48927373..48952629, complement)

Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene glutamate dehydrogenase 1 pseudogene 2 Neighboring gene cathepsin L pseudogene 3 Neighboring gene dual specificity phosphatase 8 pseudogene 2 Neighboring gene RNA, 5S ribosomal pseudogene 311 Neighboring gene ArfGAP with GTPase domain, ankyrin repeat and PH domain 13, pseudogene Neighboring gene FERM and PDZ domain containing 2 pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Other Names

  • BMS1, ribosome biogenesis factor pseudogene 1
  • BMS1, ribosome biogenesis factor pseudogene 5
  • BMS1L pseudogene 1
  • BMS1L pseudogene 5

Clone Names

  • KIAA0187

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_003611.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL731733
    Related
    ENST00000580094.5

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000010.11 Reference GRCh38.p13 Primary Assembly

    Range
    46786733..46811989
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NG_006113.4: Suppressed sequence

    Description
    NG_006113.4: This RefSeq was permanently suppressed because it is now thought that this pseudogene is transcribed.
  2. NM_001040053.1: Suppressed sequence

    Description
    NM_001040053.1: This RefSeq was permanently suppressed because it is now thought that this gene is a pseudogene.
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