fgf9.S fibroblast growth factor 9 S homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: fgf9.S
Official Full Name: fibroblast growth factor 9 S homeolog
Primary source: Xenbase:XB-GENE-6067935
Locus tag: XELAEV_18016230mg
See related: EnsemblRapid:ENSXLAG00005022863
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: fgf9; XFGF-9; fgf9-A
NEW: Try the new Gene table
Try the new Transcript table

Genomic context

Location:: chromosome: 2S

Exon count:: 3

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	2S	NC_054374.1 (149520348..149565558, complement)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	2S	NC_030727.1 (140526774..140572009, complement)

Chromosome 2S - NC_054374.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to reference sequence details

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the page Help

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

Go to the top of the page Help

Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables fibroblast growth factor receptor binding	IEA Inferred from Electronic Annotation more info
enables growth factor activity	IEA Inferred from Electronic Annotation more info
enables heparin binding	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within angiogenesis	ISA Inferred from Sequence Alignment more info	PubMed
acts_upstream_of_or_within animal organ morphogenesis	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within cell differentiation	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within cell-cell signaling	ISA Inferred from Sequence Alignment more info	PubMed
acts_upstream_of_or_within chondrocyte differentiation	ISA Inferred from Sequence Alignment more info	PubMed
acts_upstream_of_or_within embryonic digestive tract development	ISA Inferred from Sequence Alignment more info	PubMed
acts_upstream_of_or_within embryonic limb morphogenesis	ISA Inferred from Sequence Alignment more info	PubMed
acts_upstream_of_or_within embryonic skeletal system development	ISA Inferred from Sequence Alignment more info	PubMed
acts_upstream_of_or_within eye development	ISA Inferred from Sequence Alignment more info	PubMed
acts_upstream_of_or_within fibroblast growth factor receptor signaling pathway	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within fibroblast growth factor receptor signaling pathway	ISA Inferred from Sequence Alignment more info	PubMed
acts_upstream_of_or_within inner ear morphogenesis	ISA Inferred from Sequence Alignment more info	PubMed
acts_upstream_of_or_within lung development	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within lung development	ISA Inferred from Sequence Alignment more info	PubMed
acts_upstream_of_or_within lung-associated mesenchyme development	ISA Inferred from Sequence Alignment more info	PubMed
acts_upstream_of_or_within male gonad development	ISA Inferred from Sequence Alignment more info	PubMed
acts_upstream_of_or_within male sex determination	ISA Inferred from Sequence Alignment more info	PubMed
acts_upstream_of_or_within negative regulation of Wnt signaling pathway	ISA Inferred from Sequence Alignment more info	PubMed
acts_upstream_of_or_within negative regulation of transcription by RNA polymerase II	ISA Inferred from Sequence Alignment more info	PubMed
acts_upstream_of_or_within osteoblast differentiation	ISA Inferred from Sequence Alignment more info	PubMed
acts_upstream_of_or_within positive regulation of activin receptor signaling pathway	ISA Inferred from Sequence Alignment more info	PubMed
acts_upstream_of_or_within positive regulation of canonical Wnt signaling pathway	ISA Inferred from Sequence Alignment more info	PubMed
acts_upstream_of_or_within positive regulation of cardiac muscle cell proliferation	ISA Inferred from Sequence Alignment more info	PubMed
acts_upstream_of_or_within positive regulation of cell division	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within positive regulation of cell population proliferation	ISA Inferred from Sequence Alignment more info	PubMed
acts_upstream_of_or_within positive regulation of epithelial cell proliferation	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within positive regulation of epithelial cell proliferation	ISA Inferred from Sequence Alignment more info	PubMed
acts_upstream_of_or_within positive regulation of gene expression	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within positive regulation of gene expression	ISA Inferred from Sequence Alignment more info	PubMed
acts_upstream_of_or_within positive regulation of mesenchymal cell proliferation	ISA Inferred from Sequence Alignment more info	PubMed
acts_upstream_of_or_within positive regulation of protein phosphorylation	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within positive regulation of smoothened signaling pathway	ISA Inferred from Sequence Alignment more info	PubMed
acts_upstream_of_or_within positive regulation of vascular endothelial growth factor receptor signaling pathway	ISA Inferred from Sequence Alignment more info	PubMed
acts_upstream_of_or_within protein import into nucleus	ISA Inferred from Sequence Alignment more info	PubMed
acts_upstream_of_or_within regulation of cell migration	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within regulation of timing of cell differentiation	ISA Inferred from Sequence Alignment more info	PubMed
acts_upstream_of_or_within substantia nigra development	ISA Inferred from Sequence Alignment more info	PubMed

Component	Evidence Code	Pubs
located_in cytoplasm	IEA Inferred from Electronic Annotation more info
located_in extracellular exosome	ISA Inferred from Sequence Alignment more info	PubMed
located_in extracellular region	IEA Inferred from Electronic Annotation more info
located_in extracellular space	IEA Inferred from Electronic Annotation more info
located_in extracellular space	ISA Inferred from Sequence Alignment more info	PubMed

General protein information

Go to the top of the page Help

Preferred Names: fibroblast growth factor 9

Names: FGF-9; GAF; HBGF-9; glia-activating factor; heparin-binding growth factor 9

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001085807.1 → NP_001079276.1 fibroblast growth factor 9

See identical proteins and their annotated locations for NP_001079276.1

Status: PROVISIONAL

Source sequence(s)

U47622

UniProtKB/Swiss-Prot

Q91875

UniProtKB/TrEMBL

A0A974DL33, B7ZQK4

Related

ENSXLAP00005067276.1, ENSXLAT00005068804.1

Conserved Domains (1) summary

smart00442
Location:61 → 191

FGF; Acidic and basic fibroblast growth factor family

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

NC_054374.1 Reference Xenopus_laevis_v10.1 Primary Assembly

Range

149520348..149565558 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)