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DEHA2E08052g DEHA2E08052p [ Debaryomyces hansenii CBS767 ]

Gene ID: 2902196, updated on 17-May-2024

Summary

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Gene symbol
DEHA2E08052g
Gene description
DEHA2E08052p
Locus tag
DEHA2E08052g
See related
FungiDB:DEHA2E08052g; VEuPathDB:DEHA2E08052g
Gene type
protein coding
RNA name
DEHA2E08052p
RefSeq status
PROVISIONAL
Organism
Debaryomyces hansenii CBS767 (strain: CBS767, type-material: culture from type material of Debaryomyces hansenii)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Debaryomyces
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Genomic context

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Location:
chromosome: E
Exon count:
1
Sequence:
Chromosome: E; NC_006047.2 (638390..639823, complement)

Chromosome E - NC_006047.2Genomic Context describing neighboring genes Neighboring gene DEHA2E08008p Neighboring gene DEHA2E08030p Neighboring gene DEHA2E08074p Neighboring gene DEHA2E08096p

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_006047.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome evolution in yeasts. Dujon B, et al. Nature, 2004 Jul 1. PMID 15229592

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DEHA2E08052p
XP_459659.2
  • highly similar to uniprot|P38712 Saccharomyces cerevisiae YHR065C RRP3 Required for maturation of the 35S primary transcript of pre-rRNA and is required for cleavages leading to mature 18S RNA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_006047.2 Reference assembly

    Range
    638390..639823 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_459659.2 → XP_459659.2  DEHA2E08052p [Debaryomyces hansenii CBS767]

    See identical proteins and their annotated locations for XP_459659.2

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q6BQ61
    Conserved Domains (3) summary
    PRK11192
    Location:67 → 474
    PRK11192; ATP-dependent RNA helicase SrmB; Provisional
    cd00079
    Location:285 → 407
    HELICc; Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may ...
    cd00268
    Location:67 → 268
    DEADc; DEAD-box helicases. A diverse family of proteins involved in ATP-dependent RNA unwinding, needed in a variety of cellular processes including splicing, ribosome biogenesis and RNA degradation. The name derives from the sequence of the Walker B motif ...
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q6BQ61.2

Gene LinkOut

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Research Materials