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RRP7A ribosomal RNA processing 7 homolog A [ Homo sapiens (human) ]

Gene ID: 27341, updated on 9-Feb-2020

Summary

Official Symbol
RRP7Aprovided by HGNC
Official Full Name
ribosomal RNA processing 7 homolog Aprovided by HGNC
Primary source
HGNC:HGNC:24286
See related
Ensembl:ENSG00000189306
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
Rrp7; CGI-96; BK126B4.3
Expression
Ubiquitous expression in ovary (RPKM 9.4), lymph node (RPKM 9.3) and 25 other tissues See more
Orthologs

Genomic context

See RRP7A in Genome Data Viewer
Location:
22q13.2
Exon count:
7
Annotation release Status Assembly Chr Location
109.20191205 current GRCh38.p13 (GCF_000001405.39) 22 NC_000022.11 (42508344..42519796, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 22 NC_000022.10 (42904341..42915829, complement)

Chromosome 22 - NC_000022.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101927344 Neighboring gene uncharacterized LOC101927372 Neighboring gene serine hydrolase like (pseudogene) Neighboring gene Sharpr-MPRA regulatory region 9885 Neighboring gene serine hydrolase like 2 Neighboring gene RN7SK pseudogene 80

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • MGC150422, MGC150423

Gene Ontology Provided by GOA

Function Evidence Code Pubs
RNA binding HDA PubMed 
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
blastocyst formation IEA
Inferred from Electronic Annotation
more info
 
rRNA processing IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
rRNA processing TAS
Traceable Author Statement
more info
 
ribosomal small subunit assembly IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
CURI complex IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
UTP-C complex IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
cytoplasm IEA
Inferred from Electronic Annotation
more info
 
nucleoplasm TAS
Traceable Author Statement
more info
 

General protein information

Preferred Names
ribosomal RNA-processing protein 7 homolog A
Names
CTA-126B4.5
gastric cancer antigen Zg14

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_015703.5NP_056518.2  ribosomal RNA-processing protein 7 homolog A

    See identical proteins and their annotated locations for NP_056518.2

    Status: VALIDATED

    Source sequence(s)
    AL022316, BC073834
    Consensus CDS
    CCDS14036.1
    UniProtKB/Swiss-Prot
    Q9Y3A4
    Related
    ENSP00000321449.6, ENST00000323013.7
    Conserved Domains (2) summary
    cd12951
    Location:151280
    RRP7_Rrp7A; RRP7 domain ribosomal RNA-processing protein 7 homolog A (Rrp7A) and similar proteins
    cd12294
    Location:59159
    RRM_Rrp7A; RNA recognition motif in ribosomal RNA-processing protein 7 homolog A (Rrp7A) and similar proteins

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20191205

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000022.11 Reference GRCh38.p13 Primary Assembly

    Range
    42508344..42519796 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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