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HEATR5A HEAT repeat containing 5A [ Homo sapiens (human) ]

Gene ID: 25938, updated on 4-Jul-2021

Summary

Official Symbol
HEATR5Aprovided by HGNC
Official Full Name
HEAT repeat containing 5Aprovided by HGNC
Primary source
HGNC:HGNC:20276
See related
Ensembl:ENSG00000129493
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
p200b; C14orf125
Expression
Ubiquitous expression in colon (RPKM 6.4), thyroid (RPKM 5.2) and 25 other tissues See more
Orthologs
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Genomic context

See HEATR5A in Genome Data Viewer
Location:
14q12
Exon count:
36
Annotation release Status Assembly Chr Location
109.20210514 current GRCh38.p13 (GCF_000001405.39) 14 NC_000014.9 (31291788..31420550, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 14 NC_000014.8 (31760994..31889756, complement)

Chromosome 14 - NC_000014.9Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105370436 Neighboring gene asparaginyl-tRNA synthetase 1 pseudogene 1 Neighboring gene ATP synthase membrane subunit c locus 1 pseudogene 2 Neighboring gene HEATR5A divergent transcript Neighboring gene D-aminoacyl-tRNA deacylase 2 Neighboring gene ribosomal protein L9 pseudogene 4

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Potential readthrough

Included gene: DTD2

Homology

Clone Names

  • MGC72028, DKFZp781E083

Gene Ontology Provided by GOA

Process Evidence Code Pubs
involved_in endocytosis IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in protein localization IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in retrograde transport, endosome to Golgi IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 
is_active_in endocytic vesicle IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
HEAT repeat-containing protein 5A

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_015473.4NP_056288.2  HEAT repeat-containing protein 5A

    Status: VALIDATED

    Source sequence(s)
    AL136418, AL139353
    Consensus CDS
    CCDS45094.2
    UniProtKB/Swiss-Prot
    Q86XA9
    UniProtKB/TrEMBL
    F5H619
    Related
    ENSP00000437968.2, ENST00000543095.7
    Conserved Domains (1) summary
    sd00044
    Location:97121
    HEAT; HEAT repeat [structural motif]

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20210514

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000014.9 Reference GRCh38.p13 Primary Assembly

    Range
    31291788..31420550 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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