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CATSPERZ catsper channel auxiliary subunit zeta [ Homo sapiens (human) ]

Gene ID: 25858, updated on 18-Aug-2020

Summary

Official Symbol
CATSPERZprovided by HGNC
Official Full Name
catsper channel auxiliary subunit zetaprovided by HGNC
Primary source
HGNC:HGNC:19231
See related
Ensembl:ENSG00000219435 MIM:617511
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
TEX40; C11orf20
Expression
Restricted expression toward testis (RPKM 183.9) See more
Orthologs

Genomic context

See CATSPERZ in Genome Data Viewer
Location:
11q13.1
Exon count:
5
Annotation release Status Assembly Chr Location
109.20200815 current GRCh38.p13 (GCF_000001405.39) 11 NC_000011.10 (64300358..64304770)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 11 NC_000011.9 (64067863..64072239)

Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene G protein-coupled receptor 137 Neighboring gene BCL2 associated agonist of cell death Neighboring gene KCNK4-TEX40 readthrough Neighboring gene potassium two pore domain channel subfamily K member 4 Neighboring gene estrogen related receptor alpha Neighboring gene tRNA methyltransferase subunit 11-2 Neighboring gene peroxiredoxin 5

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

General gene information

Markers

Readthrough KCNK4-TEX40

Readthrough gene: KCNK4-TEX40, Included gene: KCNK4

Homology

Clone Names

  • DKFZp566E164

Gene Ontology Provided by GOA

Process Evidence Code Pubs
flagellated sperm motility IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
flagellated sperm motility ISS
Inferred from Sequence or Structural Similarity
more info
 
male meiotic nuclear division ISS
Inferred from Sequence or Structural Similarity
more info
 
sperm capacitation IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
sperm capacitation ISS
Inferred from Sequence or Structural Similarity
more info
 
spermatogenesis ISS
Inferred from Sequence or Structural Similarity
more info
 
Component Evidence Code Pubs
CatSper complex IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
CatSper complex ISS
Inferred from Sequence or Structural Similarity
more info
 
cytoplasm IDA
Inferred from Direct Assay
more info
 
sperm principal piece IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
sperm principal piece IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
cation channel sperm-associated protein subunit zeta
Names
catSper-zeta
catSperzeta
testis expressed 40
testis-expressed protein 40
testis-expressed sequence 40 protein

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001039496.2NP_001034585.1  cation channel sperm-associated protein subunit zeta

    See identical proteins and their annotated locations for NP_001034585.1

    Status: VALIDATED

    Source sequence(s)
    AL117564, AP001453
    UniProtKB/Swiss-Prot
    Q9NTU4
    Related
    ENSP00000491717.1, ENST00000328404.8

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20200815

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000011.10 Reference GRCh38.p13 Primary Assembly

    Range
    64300358..64304770
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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