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Catsperz cation channel sperm associated auxiliary subunit zeta [ Mus musculus (house mouse) ]

Gene ID: 67077, updated on 15-Apr-2019

Summary

Official Symbol
Catsperzprovided by MGI
Official Full Name
cation channel sperm associated auxiliary subunit zetaprovided by MGI
Primary source
MGI:MGI:1914327
See related
Ensembl:ENSMUSG00000050623
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Tex40; MLZ-622; 1700019N12Rik; A430107B04Rik
Expression
Restricted expression toward testis adult (RPKM 463.3) See more
Orthologs

Genomic context

See Catsperz in Genome Data Viewer
Location:
19; 19 A
Exon count:
5
Annotation release Status Assembly Chr Location
106 current GRCm38.p4 (GCF_000001635.24) 19 NC_000085.6 (6922426..6925380, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 19 NC_000085.5 (6996916..6999870, complement)

Chromosome 19 - NC_000085.6Genomic Context describing neighboring genes Neighboring gene tRNA methyltransferase 11-2 Neighboring gene estrogen related receptor, alpha Neighboring gene microRNA 6990 Neighboring gene potassium channel, subfamily K, member 4 Neighboring gene predicted gene, 46646 Neighboring gene G protein-coupled receptor 137 Neighboring gene BCL2-associated agonist of cell death

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (3) 

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
cell differentiation IEA
Inferred from Electronic Annotation
more info
 
flagellated sperm motility IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
flagellated sperm motility IMP
Inferred from Mutant Phenotype
more info
PubMed 
male meiotic nuclear division IEP
Inferred from Expression Pattern
more info
PubMed 
sperm capacitation IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
sperm capacitation IMP
Inferred from Mutant Phenotype
more info
PubMed 
spermatogenesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
CatSper complex IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
CatSper complex IDA
Inferred from Direct Assay
more info
PubMed 
cell projection IEA
Inferred from Electronic Annotation
more info
 
cilium IEA
Inferred from Electronic Annotation
more info
 
cytoplasm ISO
Inferred from Sequence Orthology
more info
 
membrane IEA
Inferred from Electronic Annotation
more info
 
motile cilium IEA
Inferred from Electronic Annotation
more info
 
plasma membrane IEA
Inferred from Electronic Annotation
more info
 
sperm principal piece IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
sperm principal piece IDA
Inferred from Direct Assay
more info
PubMed 
sperm principal piece ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
cation channel sperm-associated protein subunit zeta
Names
catSper-zeta
catSperzeta
protein expressed in male leptotene and zygotene spermatocytes 622
testis expressed 40
testis-expressed protein 40
testis-expressed sequence 40 protein

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001039494.2NP_001034583.1  cation channel sperm-associated protein subunit zeta

    See identical proteins and their annotated locations for NP_001034583.1

    Status: PROVISIONAL

    Source sequence(s)
    AK006134
    Consensus CDS
    CCDS29510.1
    UniProtKB/Swiss-Prot
    Q9CQP8
    Related
    ENSMUSP00000056681.4, ENSMUST00000057716.5

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p4 C57BL/6J

Genomic

  1. NC_000085.6 Reference GRCm38.p4 C57BL/6J

    Range
    6922426..6925380 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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