These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001277285.3 → NP_001264214.1 protein turtle homolog B precursor
Status: VALIDATED
- Source sequence(s)
-
AP000911, AP001979
- Consensus CDS
-
CCDS61010.1
- UniProtKB/Swiss-Prot
-
Q9UPX0
- UniProtKB/TrEMBL
-
Q8N7W7
- Related
- ENSP00000436552.2, ENST00000533871.7
- Conserved Domains (6) summary
-
- cd00096
Location:41 → 115
- Ig; Immunoglobulin domain
- smart00408
Location:153 → 210
- IGc2; Immunoglobulin C-2 Type
- smart00410
Location:426 → 505
- IG_like; Immunoglobulin like
- cd00063
Location:510 → 601
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam07679
Location:139 → 225
- I-set; Immunoglobulin I-set domain
- cl11960
Location:442 → 505
- Ig; Immunoglobulin domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p13 Primary Assembly
Genomic
-
NC_000011.10 Reference GRCh38.p13 Primary Assembly
- Range
-
133908410..133956960 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_011542695.2 → XP_011540997.1 protein turtle homolog B isoform X7
- Conserved Domains (6) summary
-
- cd00096
Location:41 → 115
- Ig; Immunoglobulin domain
- smart00408
Location:153 → 210
- IGc2; Immunoglobulin C-2 Type
- smart00410
Location:426 → 505
- IG_like; Immunoglobulin like
- cd00063
Location:510 → 605
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam07679
Location:139 → 225
- I-set; Immunoglobulin I-set domain
- cl11960
Location:442 → 505
- Ig; Immunoglobulin domain
-
XM_011542692.3 → XP_011540994.1 protein turtle homolog B isoform X2
- Conserved Domains (6) summary
-
- cd00096
Location:139 → 213
- Ig; Immunoglobulin domain
- smart00408
Location:251 → 308
- IGc2; Immunoglobulin C-2 Type
- smart00410
Location:524 → 603
- IG_like; Immunoglobulin like
- cd00063
Location:608 → 699
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam07679
Location:237 → 323
- I-set; Immunoglobulin I-set domain
- cl11960
Location:533 → 603
- Ig; Immunoglobulin domain
-
XM_011542691.3 → XP_011540993.1 protein turtle homolog B isoform X1
- Conserved Domains (6) summary
-
- cd00096
Location:139 → 213
- Ig; Immunoglobulin domain
- smart00408
Location:251 → 308
- IGc2; Immunoglobulin C-2 Type
- smart00410
Location:524 → 603
- IG_like; Immunoglobulin like
- cd00063
Location:608 → 703
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam07679
Location:237 → 323
- I-set; Immunoglobulin I-set domain
- cl11960
Location:533 → 603
- Ig; Immunoglobulin domain
-
XM_017017393.1 → XP_016872882.1 protein turtle homolog B isoform X3
-
XM_024448402.1 → XP_024304170.1 protein turtle homolog B isoform X8
- Conserved Domains (5) summary
-
- cd00063
Location:352 → 447
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam13927
Location:70 → 149
- Ig_3; Immunoglobulin domain
- cd00096
Location:1 → 64
- Ig; Immunoglobulin domain
- cl11960
Location:195 → 256
- Ig; Immunoglobulin domain
- cl26464
Location:740 → 1088
- Atrophin-1; Atrophin-1 family
-
XM_017017396.1 → XP_016872885.1 protein turtle homolog B isoform X9
-
XM_006718795.3 → XP_006718858.1 protein turtle homolog B isoform X10
- Conserved Domains (1) summary
-
- cd00063
Location:93 → 175
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
-
XM_011542694.3 → XP_011540996.1 protein turtle homolog B isoform X4
- Conserved Domains (6) summary
-
- cd00096
Location:139 → 213
- Ig; Immunoglobulin domain
- smart00408
Location:251 → 308
- IGc2; Immunoglobulin C-2 Type
- smart00410
Location:524 → 603
- IG_like; Immunoglobulin like
- cd00063
Location:608 → 703
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam07679
Location:237 → 323
- I-set; Immunoglobulin I-set domain
- cl11960
Location:533 → 603
- Ig; Immunoglobulin domain
-
XM_017017395.2 → XP_016872884.1 protein turtle homolog B isoform X6
-
XM_017017394.2 → XP_016872883.1 protein turtle homolog B isoform X5
RNA
-
XR_947812.3 RNA Sequence
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_014987.1: Suppressed sequence
- Description
- NM_014987.1: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript and the protein, and the transcript appears to be partial on the 3' end.