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DNAJC8 DnaJ heat shock protein family (Hsp40) member C8 [ Homo sapiens (human) ]

Gene ID: 22826, updated on 21-Dec-2019

Summary

Official Symbol
DNAJC8provided by HGNC
Official Full Name
DnaJ heat shock protein family (Hsp40) member C8provided by HGNC
Primary source
HGNC:HGNC:15470
See related
Ensembl:ENSG00000126698
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
SPF31; HSPC331
Expression
Ubiquitous expression in lymph node (RPKM 41.4), endometrium (RPKM 36.7) and 25 other tissues See more
Orthologs

Genomic context

See DNAJC8 in Genome Data Viewer
Location:
1p35.3
Exon count:
10
Annotation release Status Assembly Chr Location
109.20191205 current GRCh38.p13 (GCF_000001405.39) 1 NC_000001.11 (28200278..28233029, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (28526789..28559542, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene RNA, U7 small nuclear 29 pseudogene Neighboring gene platelet activating factor receptor Neighboring gene ATP synthase inhibitory factor subunit 1 Neighboring gene sestrin 2

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

HIV-1 interactions

Protein interactions

Protein Gene Interaction Pubs
retropepsin gag-pol Positional proteomics analysis identifies the cleavage of human DnaJ (Hsp40) homolog, subfamily C, member 8 (DNAJC8) at amino acid residues 62-63 by the HIV-1 protease PubMed

Go to the HIV-1, Human Interaction Database

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
Hsp70 protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
mRNA splicing, via spliceosome TAS
Traceable Author Statement
more info
 
Component Evidence Code Pubs
cytosol IDA
Inferred from Direct Assay
more info
 
intercellular bridge IDA
Inferred from Direct Assay
more info
 
nucleoplasm IDA
Inferred from Direct Assay
more info
 
nucleoplasm TAS
Traceable Author Statement
more info
 
nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
nucleus IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
dnaJ homolog subfamily C member 8
Names
DnaJ (Hsp40) homolog, subfamily C, member 8
splicing protein spf31

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_014280.3NP_055095.2  dnaJ homolog subfamily C member 8

    See identical proteins and their annotated locations for NP_055095.2

    Status: VALIDATED

    Source sequence(s)
    AL353354, DB294321
    Consensus CDS
    CCDS41292.1
    UniProtKB/Swiss-Prot
    O75937
    Related
    ENSP00000263697.4, ENST00000263697.6
    Conserved Domains (2) summary
    cd06257
    Location:57112
    DnaJ; DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, ...
    COG2214
    Location:51238
    CbpA; Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription]

RNA

  1. NR_159454.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL353354, AL353622
    Related
    ENST00000489277.5

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20191205

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p13 Primary Assembly

    Range
    28200278..28233029 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p13 PATCHES

Genomic

  1. NW_018654706.1 Reference GRCh38.p13 PATCHES

    Range
    1986..26673 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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