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Slc25a29 solute carrier family 25 (mitochondrial carrier, palmitoylcarnitine transporter), member 29 [ Mus musculus (house mouse) ]

Gene ID: 214663, updated on 5-Mar-2024

Summary

Official Symbol
Slc25a29provided by MGI
Official Full Name
solute carrier family 25 (mitochondrial carrier, palmitoylcarnitine transporter), member 29provided by MGI
Primary source
MGI:MGI:2444911
See related
Ensembl:ENSMUSG00000021265 AllianceGenome:MGI:2444911
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
CACL; mCACL; C030003J19Rik
Summary
Enables acyl carnitine transmembrane transporter activity and basic amino acid transmembrane transporter activity. Involved in mitochondrial L-ornithine transmembrane transport. Acts upstream of or within acyl carnitine transport. Located in mitochondrion. Orthologous to human SLC25A29 (solute carrier family 25 member 29). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Broad expression in adrenal adult (RPKM 45.1), genital fat pad adult (RPKM 17.5) and 20 other tissues See more
Orthologs
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Genomic context

Location:
12 F1; 12 59.62 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 12 NC_000078.7 (108791804..108801802, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 12 NC_000078.6 (108825878..108835876, complement)

Chromosome 12 - NC_000078.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 34220 Neighboring gene STARR-positive B cell enhancer ABC_E11524 Neighboring gene YY1 transcription factor Neighboring gene STARR-positive B cell enhancer ABC_E7179 Neighboring gene predicted gene, 53767 Neighboring gene microRNA 345 Neighboring gene solute carrier family 25, member 47

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (1) 
  • Endonuclease-mediated (1) 

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
located_in mitochondrial inner membrane IEA
Inferred from Electronic Annotation
more info
 
located_in mitochondrion HDA PubMed 
is_active_in mitochondrion IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in mitochondrion IDA
Inferred from Direct Assay
more info
PubMed 
located_in mitochondrion ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
mitochondrial basic amino acids transporter
Names
carnitine/acylcarnitine translocase-like
mitochondrial carnitine/acylcarnitine carrier protein CACL
mitochondrial ornithine transporter 3
solute carrier family 25 member 29

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_181328.3NP_851845.1  mitochondrial basic amino acids transporter

    See identical proteins and their annotated locations for NP_851845.1

    Status: PROVISIONAL

    Source sequence(s)
    AK047628
    Consensus CDS
    CCDS26164.1
    UniProtKB/Swiss-Prot
    Q8BL03, Q922X4
    Related
    ENSMUSP00000021693.4, ENSMUST00000021693.4
    Conserved Domains (2) summary
    PTZ00169
    Location:2259
    PTZ00169; ADP/ATP transporter on adenylate translocase; Provisional
    pfam00153
    Location:88175
    Mito_carr; Mitochondrial carrier protein

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000078.7 Reference GRCm39 C57BL/6J

    Range
    108791804..108801802 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)