U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Zfp658 zinc finger protein 658 [ Mus musculus (house mouse) ]

Gene ID: 210104, updated on 8-Feb-2024

Summary

Official Symbol
Zfp658provided by MGI
Official Full Name
zinc finger protein 658provided by MGI
Primary source
MGI:MGI:2652821
See related
Ensembl:ENSMUSG00000056592 AllianceGenome:MGI:2652821
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Summary
Predicted to enable DNA-binding transcription activator activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. [provided by Alliance of Genome Resources, Apr 2022]
Expression
Broad expression in CNS E18 (RPKM 3.4), CNS E14 (RPKM 3.0) and 22 other tissues See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See Zfp658 in Genome Data Viewer
Location:
7 B3; 7 28.25 cM
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (43211794..43225566)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (43562202..43576142)

Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene Siglec family like 1 Neighboring gene CD33 molecule Neighboring gene STARR-positive B cell enhancer ABC_E9290 Neighboring gene zinc finger protein 719 Neighboring gene STARR-seq mESC enhancer starr_18778 Neighboring gene STARR-seq mESC enhancer starr_18779 Neighboring gene zinc finger protein 819

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (2) 

General gene information

Markers

Clone Names

  • MGC102645

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001008549.2NP_001008549.1  zinc finger protein 658

    See identical proteins and their annotated locations for NP_001008549.1

    Status: VALIDATED

    Source sequence(s)
    AC154108
    Consensus CDS
    CCDS39931.1
    UniProtKB/TrEMBL
    Q5PPQ4
    Related
    ENSMUSP00000103606.2, ENSMUST00000107972.8
    Conserved Domains (3) summary
    smart00349
    Location:2380
    KRAB; krueppel associated box
    COG5048
    Location:493887
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:638658
    ZF_C2H2; C2H2 Zn finger [structural motif]

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000073.7 Reference GRCm39 C57BL/6J

    Range
    43211794..43225566
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006540757.4XP_006540820.1  zinc finger protein 658 isoform X1

    See identical proteins and their annotated locations for XP_006540820.1

    UniProtKB/TrEMBL
    Q5PPQ4
    Conserved Domains (3) summary
    smart00349
    Location:2380
    KRAB; krueppel associated box
    COG5048
    Location:493887
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:638658
    ZF_C2H2; C2H2 Zn finger [structural motif]